RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ATP8B3O60423 1300 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 KANSL1LA0AUZ9 987 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 BICDL2A1A5D9 508 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 GALR2O43603 387 aaPredicted RBP15.74■□□□□ 0.11
LIMS4-201ENST00000413601 DCNP07585 359 aaKnown RBP15.74■□□□□ 0.11
LIMS4-201ENST00000413601 AVPR1AP37288 418 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 NUBP1P53384 320 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 INCA1Q0VD86 236 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 IFRD2Q12894 506 aaPredicted RBP15.74■□□□□ 0.11
LIMS4-201ENST00000413601 PAK1Q13153 545 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 CCDC40Q4G0X9 1142 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 CLEC17AQ6ZS10 378 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 FRMD5Q7Z6J6 570 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 CELF5Q8N6W0 485 aaKnown RBP15.74■□□□□ 0.11
LIMS4-201ENST00000413601 TRIML1Q8N9V2 468 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 PJA1Q8NG27 643 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 BPIFB1Q8TDL5 484 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 USP13Q92995 863 aaPredicted RBP15.74■□□□□ 0.11
LIMS4-201ENST00000413601 TATDN2Q93075 761 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 ZFYVE19Q96K21 471 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 CYP2S1Q96SQ9 504 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 METTL14Q9HCE5 456 aaKnown RBP15.74■□□□□ 0.11
LIMS4-201ENST00000413601 TRPC7Q9HCX4 862 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 FAM49BQ9NUQ9 324 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 CCL26Q9Y258 94 aa15.74■□□□□ 0.11
LIMS4-201ENST00000413601 MTF2Q9Y483 593 aaPredicted RBP15.74■□□□□ 0.11
LIMS4-201ENST00000413601 C2orf78A6NCI8 922 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 SOBPA7XYQ1 873 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 ARNTLO00327 626 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 CHADO15335 359 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 KCNA4P22459 653 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 NHLH1Q02575 133 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 UBXN2BQ14CS0 331 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 WDR44Q5JSH3 913 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 FOXR2Q6PJQ5 311 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 CCDC105Q8IYK2 499 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 SLC2A14Q8TDB8 520 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 WHAMMQ8TF30 809 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 SMARCD1Q96GM5 515 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 SLC22A12Q96S37 553 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 TTLL2Q9BWV7 592 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 NT5C1AQ9BXI3 368 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 TRPV5Q9NQA5 729 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 KRT82Q9NSB4 513 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 TDP1Q9NUW8 608 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 EHD2Q9NZN4 543 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 COQ4Q9Y3A0 265 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 MUC6Q6W4X9 2439 aa15.73■□□□□ 0.11
LIMS4-201ENST00000413601 TRAV19A0A0A6YYK7 116 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 SHISA7A6NL88 538 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 FAM170BA6NMN3 283 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 CILPO75339 1184 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 AP1G2O75843 785 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 BEST1O76090 585 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 ADORA2BP29275 332 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 PTPN5P54829 565 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 ARHGAP29Q52LW3 1261 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 NUP93Q8N1F7 819 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 ARL14EPQ8N8R7 260 aaPredicted RBP15.72■□□□□ 0.11
LIMS4-201ENST00000413601 DTWD2Q8NBA8 298 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 TTC8Q8TAM2 541 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 CSGALNACT1Q8TDX6 532 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 ARID3AQ99856 593 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 SRRTQ9BXP5 876 aaKnown RBP15.72■□□□□ 0.11
LIMS4-201ENST00000413601 CLSTN2Q9H4D0 955 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 LTB4R2Q9NPC1 389 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 DMAP1Q9NPF5 467 aaPredicted RBP15.72■□□□□ 0.11
LIMS4-201ENST00000413601 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 DLGAP2Q9P1A6 1054 aa15.72■□□□□ 0.11
LIMS4-201ENST00000413601 H0Y858 1186 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 ABL1P00519 1130 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 CKMP06732 381 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 USP17L7P0C7H9 530 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 GLULP15104 373 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 HDCP19113 662 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 TRIM21P19474 475 aaKnown RBP15.71■□□□□ 0.11
LIMS4-201ENST00000413601 YWHAQP27348 245 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 FMO5P49326 533 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 MAP3K7CLP57077 242 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 TAF10Q12962 218 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 ZNF394Q53GI3 561 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 ZNF852Q6ZMS4 543 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 TTC16Q8NEE8 873 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 ZMIZ2Q8NF64 920 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 SCAMP5Q8TAC9 235 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 RIN3Q8TB24 985 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 CYFIP2Q96F07 1278 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 FAXDC2Q96IV6 333 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 HNRNPABQ99729 332 aaKnown RBP15.71■□□□□ 0.11
LIMS4-201ENST00000413601 SMOQ99835 787 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 GKN1Q9NS71 199 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 CISHQ9NSE2 258 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 LMBRD1Q9NUN5 540 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 THG1LQ9NWX6 298 aaKnown RBP15.71■□□□□ 0.11
LIMS4-201ENST00000413601 GTSE1Q9NYZ3 720 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 GCNT4Q9P109 453 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 PIAS3Q9Y6X2 628 aa15.71■□□□□ 0.11
LIMS4-201ENST00000413601 ZNF840PA6NDX5 716 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 TNFRSF10BO14763 440 aa15.7■□□□□ 0.1
LIMS4-201ENST00000413601 RTN3O95197 1032 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms