RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 KYAT1Q16773 422 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 ZNF568Q3ZCX4 644 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 ACAD10Q6JQN1 1059 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 GPR149Q86SP6 731 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 NME8Q8N427 588 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 RPS6KC1Q96S38 1066 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 TCHPQ9BT92 498 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 UBXN6Q9BZV1 441 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 CARD9Q9H257 536 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 GOLPH3Q9H4A6 298 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 ELAC1Q9H777 363 aaKnown RBP18.14■□□□□ 0.49
PTPRC-206ENST00000413409 AVENQ9NQS1 362 aaPredicted RBP18.14■□□□□ 0.49
PTPRC-206ENST00000413409 STIM2Q9P246 746 aa18.14■□□□□ 0.49
PTPRC-206ENST00000413409 FAM208BQ5VWN6 2430 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 ANK1P16157 1881 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 ANKRD11Q6UB99 2663 aaPredicted RBP18.13■□□□□ 0.49
PTPRC-206ENST00000413409 CCDC188H7C350 402 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 INO80B-WBP1J3KQ70 363 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 DDX3YO15523 660 aaKnown RBP18.13■□□□□ 0.49
PTPRC-206ENST00000413409 PHACTR2O75167 634 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 ADRB1P08588 477 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 MCF2P10911 925 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 GLULP15104 373 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 TMOD1P28289 359 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 TNFSF9P41273 254 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 PLA2G4AP47712 749 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 DNA2P51530 1060 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 DUOXA2Q1HG44 320 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 VARS2Q5ST30 1063 aaKnown RBP18.13■□□□□ 0.49
PTPRC-206ENST00000413409 MTHFD1LQ6UB35 978 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 ZNF653Q96CK0 615 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 INO80BQ9C086 356 aaPredicted RBP18.13■□□□□ 0.49
PTPRC-206ENST00000413409 CDT1Q9H211 546 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 VIPAS39Q9H9C1 493 aa18.13■□□□□ 0.49
PTPRC-206ENST00000413409 NT5C1B-RDH14C9J2C7 533 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 CEP104O60308 925 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 UNGP13051 313 aaPredicted RBP18.12■□□□□ 0.49
PTPRC-206ENST00000413409 CA8P35219 290 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 ZNF132P52740 706 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 AMHR2Q16671 573 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 CCNI2Q6ZMN8 369 aaPredicted RBP18.12■□□□□ 0.49
PTPRC-206ENST00000413409 CCDC149Q6ZUS6 474 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 FAM228AQ86W67 206 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 KIAA0319LQ8IZA0 1049 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 FAXDC2Q96IV6 333 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 FAM84AQ96KN4 292 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 NAP1L3Q99457 506 aaPredicted RBP18.12■□□□□ 0.49
PTPRC-206ENST00000413409 LRRC1Q9BTT6 524 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 NIF3L1Q9GZT8 377 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 ACBD3Q9H3P7 528 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 IFT122Q9HBG6 1241 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 IGSF9Q9P2J2 1179 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 PKD1L2Q7Z442 2459 aa18.12■□□□□ 0.49
PTPRC-206ENST00000413409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.11■□□□□ 0.49
PTPRC-206ENST00000413409 TULP1O00294 542 aaPredicted RBP18.11■□□□□ 0.49
PTPRC-206ENST00000413409 CLSTN1O94985 981 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 TNNC2P02585 160 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 CYP1A1P04798 512 aaPredicted RBP18.11■□□□□ 0.49
PTPRC-206ENST00000413409 SDHBP21912 280 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 TGM1P22735 817 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 CBX1P83916 185 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 CENPCQ03188 943 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 CLLU1OSQ5K130 101 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 EEF1DP3Q658K8 133 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 SPOPLQ6IQ16 392 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 FAM43BQ6ZT52 329 aaPredicted RBP18.11■□□□□ 0.49
PTPRC-206ENST00000413409 ZNF410Q86VK4 478 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 LRRC43Q8N309 656 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 SLC44A3Q8N4M1 653 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 RBBP8NLQ8NC74 664 aaPredicted RBP18.11■□□□□ 0.49
PTPRC-206ENST00000413409 ZNF564Q8TBZ8 553 aaPredicted RBP18.11■□□□□ 0.49
PTPRC-206ENST00000413409 AENQ8WTP8 325 aaKnown RBP18.11■□□□□ 0.49
PTPRC-206ENST00000413409 MTMR12Q9C0I1 747 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 ZBP1Q9H171 429 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 ACP6Q9NPH0 428 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 SIT1Q9Y3P8 196 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 NUB1Q9Y5A7 615 aa18.11■□□□□ 0.49
PTPRC-206ENST00000413409 FASNP49327 2511 aaKnown RBP18.1■□□□□ 0.49
PTPRC-206ENST00000413409 GPR182O15218 404 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 B4GALT5O43286 388 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 TMEM191BP0C7N4 346 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 YWHAEP62258 255 aaKnown RBP18.1■□□□□ 0.49
PTPRC-206ENST00000413409 GPS2Q13227 327 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 CASP8Q14790 479 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 PPP2R5EQ16537 467 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 TMEM132AQ24JP5 1023 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 SEZ6Q53EL9 994 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 TMEM173Q86WV6 379 aaPredicted RBP18.1■□□□□ 0.49
PTPRC-206ENST00000413409 VPS52Q8N1B4 723 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 UBL4BQ8N7F7 174 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 ANKRD36BP1Q96IX9 119 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 PPP1R16BQ96T49 567 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 NUP85Q9BW27 656 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 MINDY3Q9H8M7 445 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 RPF1Q9H9Y2 349 aaKnown RBP18.1■□□□□ 0.49
PTPRC-206ENST00000413409 NCDNQ9UBB6 729 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 AKT3Q9Y243 479 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 PCDHB4Q9Y5E5 795 aa18.1■□□□□ 0.49
PTPRC-206ENST00000413409 CTNNA2P26232 953 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 GNA15P30679 374 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms