RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SERPINB4P48594 390 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 INHBEP58166 350 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 SLC25A11Q02978 314 aaKnown RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 HADHQ16836 314 aaKnown RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 NET1Q7Z628 596 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 CCDC28BQ9BUN5 200 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 FAM192AQ9GZU8 254 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 HAPLN2Q9GZV7 340 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 ARHGEF4Q9NR80 690 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 HOMER2Q9NSB8 354 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 DNAJB4Q9UDY4 337 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 SEPT9Q9UHD8 586 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 PCDHGC3Q9UN70 934 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 TCRBV7S3A2A0A539 114 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 KCNA3P22001 575 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 THOC5Q13769 683 aaKnown RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 OR5B17Q8NGF7 314 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 FNIP1Q8TF40 1166 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 APBB2Q92870 758 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 TTC17Q96AE7 1141 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 C7orf26Q96N11 449 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 PNPLA8Q9NP80 782 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 CPSF2Q9P2I0 782 aaKnown RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 A0A0B4J269 797 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 CAPN14A8MX76 684 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 MAP3K13O43283 966 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 ASS1P00966 412 aaKnown RBP18.42■□□□□ 0.54
SDCBP-202ENST00000413219 KDELR1P24390 212 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 CACNA2D1P54289 1103 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 PRKCEQ02156 737 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 FAAP100Q0VG06 881 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 TRMT5Q32P41 509 aaKnown RBP18.42■□□□□ 0.54
SDCBP-202ENST00000413219 WDR78Q5VTH9 848 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 SWSAP1Q6NVH7 229 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 VSIG10LQ86VR7 867 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 MSTO1Q9BUK6 570 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 ZNF341Q9BYN7 854 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 KRT82Q9NSB4 513 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 CHMP2BQ9UQN3 213 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 PPME1Q9Y570 386 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 TCRBV9S1A1TA0A576 114 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 KLHL33A6NCF5 533 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 APOC4-APOC2K7ER74 178 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 STAM2O75886 525 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 APOC2P02655 101 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 PYGBP11216 843 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 RAB27AP51159 221 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 DYNLT1P63172 113 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 TBCCQ15814 346 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 GPAT2Q6NUI2 795 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 MTHFD1LQ6UB35 978 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 TTC7BQ86TV6 843 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 SESTD1Q86VW0 696 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 UNC45BQ8IWX7 931 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 DTX3LQ8TDB6 740 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 NMUR2Q9GZQ4 415 aa18.42■□□□□ 0.54
SDCBP-202ENST00000413219 SAE1Q9UBE0 346 aaPredicted RBP18.42■□□□□ 0.54
SDCBP-202ENST00000413219 YDJCA8MPS7 323 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 I3L4J1 428 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 PIAS1O75925 651 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 KCNA2P16389 499 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 BRD2P25440 801 aaKnown RBP18.41■□□□□ 0.54
SDCBP-202ENST00000413219 PSMA2P25787 234 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 POLR2BP30876 1174 aaKnown RBP18.41■□□□□ 0.54
SDCBP-202ENST00000413219 ELK3P41970 407 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 NAMPTP43490 491 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 MAP3K10Q02779 954 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 DPYSL3Q14195 570 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 XKR3Q5GH77 459 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 C6orf163Q5TEZ5 329 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 RNF220Q5VTB9 566 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 TTC39BQ5VTQ0 682 aaPredicted RBP18.41■□□□□ 0.54
SDCBP-202ENST00000413219 WDTC1Q8N5D0 677 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 SMC1BQ8NDV3 1235 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 METTL5Q9NRN9 209 aaKnown RBP18.41■□□□□ 0.54
SDCBP-202ENST00000413219 MKS1Q9NXB0 559 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 TEX264Q9Y6I9 313 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 ADGRA2Q96PE1 1338 aa18.41■□□□□ 0.54
SDCBP-202ENST00000413219 WDR81Q562E7 1941 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 B2RBV5 119 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 COPEO14579 308 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 LRCH4O75427 683 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 GRM1Q13255 1194 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 EMC2Q15006 297 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 KBTBD12Q3ZCT8 623 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 DNAL1Q4LDG9 190 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 ATG16L1Q676U5 607 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 SLC26A11Q86WA9 606 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 ZBTB45Q96K62 511 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 FAM161BQ96MY7 647 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 FRMD8Q9BZ67 464 aaPredicted RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 IQCGQ9H095 443 aaKnown RBP18.4■□□□□ 0.54
SDCBP-202ENST00000413219 WWP1Q9H0M0 922 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 C10orf88Q9H8K7 445 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 PIDD1Q9HB75 910 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 SLC9A2Q9UBY0 812 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 ZNF180Q9UJW8 692 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 K7ERI5 159 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 MCF2LO15068 1137 aa18.4■□□□□ 0.54
SDCBP-202ENST00000413219 CIB2O75838 187 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms