RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 IRF2BP1Q8IU81 584 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 CMTM8Q8IZV2 173 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 TMEM105Q8N8V8 129 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 ZMIZ2Q8NF64 920 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 SCAMP5Q8TAC9 235 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 TTC8Q8TAM2 541 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 KAT5Q92993 513 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 CYFIP2Q96F07 1278 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 TRMT2BQ96GJ1 504 aaKnown RBP13.95□□□□□ -0.18
SSB-203ENST00000413002 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
SSB-203ENST00000413002 TBC1D17Q9HA65 648 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 TRPV4Q9HBA0 871 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 HEBP1Q9NRV9 189 aa13.95□□□□□ -0.18
SSB-203ENST00000413002 UXTQ9UBK9 157 aaPredicted RBP13.95□□□□□ -0.18
SSB-203ENST00000413002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.95□□□□□ -0.18
SSB-203ENST00000413002 ATP8B3O60423 1300 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 GNA14O95837 355 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
SSB-203ENST00000413002 CCDC192P0DO97 292 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 RFX1P22670 979 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 AVPR1AP37288 418 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 RAD23BP54727 409 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 TAF10Q12962 218 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 CUL2Q13617 745 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 TPD52L1Q16890 204 aaPredicted RBP13.94□□□□□ -0.18
SSB-203ENST00000413002 MON1AQ86VX9 555 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 MFSD6LQ8IWD5 586 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 YAF2Q8IY57 180 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 ARL14EPQ8N8R7 260 aaPredicted RBP13.94□□□□□ -0.18
SSB-203ENST00000413002 SLC4A11Q8NBS3 891 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 LMO3Q8TAP4 145 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 RIN3Q8TB24 985 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 USP13Q92995 863 aaPredicted RBP13.94□□□□□ -0.18
SSB-203ENST00000413002 SMARCD1Q96GM5 515 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 CNOT6LQ96LI5 555 aaKnown RBP13.94□□□□□ -0.18
SSB-203ENST00000413002 FOXQ1Q9C009 403 aa13.94□□□□□ -0.18
SSB-203ENST00000413002 DMAP1Q9NPF5 467 aaPredicted RBP13.94□□□□□ -0.18
SSB-203ENST00000413002 CHORDC1Q9UHD1 332 aaPredicted RBP13.94□□□□□ -0.18
SSB-203ENST00000413002 ZNF263O14978 683 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 FGFR1OPO95684 399 aaKnown RBP13.93□□□□□ -0.18
SSB-203ENST00000413002 CALCAP01258 141 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 MARSP56192 900 aaKnown RBP13.93□□□□□ -0.18
SSB-203ENST00000413002 MLF2Q15773 248 aaPredicted RBP13.93□□□□□ -0.18
SSB-203ENST00000413002 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
SSB-203ENST00000413002 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
SSB-203ENST00000413002 RRAGAQ7L523 313 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 GPRIN1Q7Z2K8 1008 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 ARHGEF19Q8IW93 802 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 NUP93Q8N1F7 819 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 TMEM176AQ96HP8 235 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 NT5C1BQ96P26 610 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 HNRNPABQ99729 332 aaKnown RBP13.93□□□□□ -0.18
SSB-203ENST00000413002 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 TTLL2Q9BWV7 592 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 TRPM5Q9NZQ8 1165 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 HCN4Q9Y3Q4 1203 aa13.93□□□□□ -0.18
SSB-203ENST00000413002 MTF2Q9Y483 593 aaPredicted RBP13.93□□□□□ -0.18
SSB-203ENST00000413002 ZNF840PA6NDX5 716 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 TNFRSF10BO14763 440 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 CKMP06732 381 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 DCNP07585 359 aaKnown RBP13.92□□□□□ -0.18
SSB-203ENST00000413002 FAM200BP0CF97 657 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 YWHAQP27348 245 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 SOX9P48436 509 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 PGFP49763 221 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 SLC5A3P53794 718 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 PFKPQ01813 784 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 APBA1Q02410 837 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 TNK2Q07912 1038 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 CLEC20AQ6ZU45 233 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 TPRG1Q6ZUI0 275 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 CELF5Q8N6W0 485 aaKnown RBP13.92□□□□□ -0.18
SSB-203ENST00000413002 EHBP1Q8NDI1 1231 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 BPIFB1Q8TDL5 484 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 DEPDC1BQ8WUY9 529 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 FBXO32Q969P5 355 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 INTS2Q9H0H0 1204 aaKnown RBP13.92□□□□□ -0.18
SSB-203ENST00000413002 TDP1Q9NUW8 608 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 GCNT4Q9P109 453 aa13.92□□□□□ -0.18
SSB-203ENST00000413002 TRAV19A0A0A6YYK7 116 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 SHISA7A6NL88 538 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 SCAMP3O14828 347 aaKnown RBP13.91□□□□□ -0.18
SSB-203ENST00000413002 CD19P15391 556 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 HDCP19113 662 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 AOC1P19801 751 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 DDX6P26196 483 aaKnown RBP eCLIP13.91□□□□□ -0.189e-6■□□□□ 10.1
SSB-203ENST00000413002 MTIF2P46199 727 aaKnown RBP13.91□□□□□ -0.18
SSB-203ENST00000413002 FCHO2Q0JRZ9 810 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 CETN1Q12798 172 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 UBXN2BQ14CS0 331 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 TRIM68Q6AZZ1 485 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 UBR7Q8N806 425 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 PRSS33Q8NF86 280 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 IRF7Q92985 503 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 E2F7Q96AV8 911 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 RNF38Q9H0F5 515 aa13.91□□□□□ -0.18
SSB-203ENST00000413002 CSNK1G1Q9HCP0 422 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms