RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 YTHDC1Q96MU7 727 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 FCRL3Q96P31 734 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 SLC22A12Q96S37 553 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CYP2S1Q96SQ9 504 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 PYM1Q9BRP8 204 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 NTPCRQ9BSD7 190 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TIPINQ9BVW5 301 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM60Q9H2L4 133 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 PRORYQ9H606 182 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CLMPQ9H6B4 373 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 RPF1Q9H9Y2 349 aaKnown RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 PRDM16Q9HAZ2 1276 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ZSWIM6Q9HCJ5 1215 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ABCB6Q9NP58 842 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ARHGEF4Q9NR80 690 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TM7SF3Q9NS93 570 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 GJB4Q9NTQ9 266 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 GCNT4Q9P109 453 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CALCOCO1Q9P1Z2 691 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TBC1D14Q9P2M4 693 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ORC3Q9UBD5 711 aaPredicted RBP2.55□□□□□ -2
RNU4-53P-201ENST00000410828 ARHGAP26Q9UNA1 814 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 KIAA1024Q9UPX6 916 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 DNM3Q9UQ16 869 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 DOPEY2Q9Y3R5 2298 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 PCDHGB2Q9Y5G2 931 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 CYP46A1Q9Y6A2 500 aa2.55□□□□□ -2
RNU4-53P-201ENST00000410828 TLN1Q9Y490 2541 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 NUP205Q92621 2012 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 THADAQ6YHU6 1953 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SMG1Q96Q15 3661 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 NBEAQ8NFP9 2946 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PIEZO2Q9H5I5 2752 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ANO9A1A5B4 782 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 FAM149AA5PLN7 773 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 C2orf78A6NCI8 922 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GOLGA8CPA6NN73 597 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SFI1A8K8P3 1242 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MEI4A8MW99 385 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 KPNA7A9QM74 516 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 BTBD18B2RXH4 712 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 H0YCG3 227 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ERVH48-1M5A8F1 160 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LEFTY2O00292 366 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 WNT7AO00755 349 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PPEF2O14830 753 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 OGTO15294 1046 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 BCAT2O15382 392 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 HUS1O60921 280 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ADAM23O75077 832 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CILPO75339 1184 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TADA3O75528 432 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 NOL4O94818 638 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DKK1O94907 266 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 REC8O95072 547 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CYP17A1P05093 508 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ADRB2P07550 413 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MAPTP10636 758 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CHRM1P11229 460 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ADH5P11766 374 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CDK4P11802 303 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PLS3P13797 630 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 JUPP14923 745 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GABRG2P18507 467 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 NDUFV2P19404 249 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SCP2P22307 547 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CYP2F1P24903 491 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GUCY2CP25092 1073 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MAOBP27338 520 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PCSK1P29120 753 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CD6P30203 668 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 NTSR1P30989 418 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MCM7P33993 719 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 HNF1BP35680 557 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 EIF2S3P41091 472 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PNPLA4P41247 253 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TNFSF9P41273 254 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MATKP42679 507 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GRK6P43250 576 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PPP3CCP48454 512 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GPR15P49685 360 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LIG4P49917 911 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GUCY2FP51841 1108 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SLC7A9P82251 487 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ATP2C1P98194 919 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MYL7Q01449 175 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SEMG2Q02383 582 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GAD2Q05329 585 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ORC2Q13416 577 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TRIM29Q14134 588 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PDIA5Q14554 519 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM132DQ14C87 1099 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SAFBQ15424 915 aaKnown RBP eCLIP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ENOX2Q16206 610 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ECM1Q16610 540 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GAB4Q2WGN9 574 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 HLA-BQ31612 363 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 INAVAQ3KP66 663 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CFAP221Q4G0U5 840 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms