RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ZGPATQ8N5A5 531 aaKnown RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 OR52N2Q8NGI0 321 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PROKR1Q8TCW9 393 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 STON2Q8WXE9 905 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 PPM1EQ8WY54 764 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 SPSB4Q96A44 273 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 CEP95Q96GE4 821 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 RIPOR3Q96MK2 946 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NELL2Q99435 816 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 NDC1Q9BTX1 674 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 GPR87Q9BY21 358 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 BHMT2Q9H2M3 363 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TOR3AQ9H497 397 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 FAM83DQ9H4H8 585 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 TM7SF3Q9NS93 570 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 STAP2Q9UGK3 403 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 HDAC9Q9UKV0 1011 aa3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 MTO1Q9Y2Z2 717 aaKnown RBP3.09□□□□□ -1.91
RNU6-1140P-201ENST00000410517 ATRNL1Q5VV63 1379 aa3.09□□□□□ -1.92
RNU6-1140P-201ENST00000410517 CEP162Q5TB80 1403 aa3.09□□□□□ -1.92
RNU6-1140P-201ENST00000410517 CCDC141Q6ZP82 1450 aa3.09□□□□□ -1.92
RNU6-1140P-201ENST00000410517 ARHGAP23Q9P227 1491 aa3.09□□□□□ -1.92
RNU6-1140P-201ENST00000410517 POLR2AP24928 1970 aaKnown RBP3.09□□□□□ -1.92
RNU6-1140P-201ENST00000410517 NEURL4Q96JN8 1562 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 IQGAP1P46940 1657 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 ADGBQ8N7X0 1667 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 KIDINS220Q9ULH0 1771 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 CCDC195A0A1B0GUA6 201 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TCRBV7S2A1N4TA0A589 114 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TRIM43BA6NCK2 446 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 POM121BA6NF01 834 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 LRRC14BA6NHZ5 514 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 CLCA1A8K7I4 914 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 MYO1FO00160 1098 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 POLRMTO00411 1230 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 BTN3A1O00481 513 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TOR1BO14657 336 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TRIAP1O43715 76 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 AGFG2O95081 481 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 MATN4O95460 622 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 ABHD16AO95870 558 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 GPANK1O95872 356 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 ITGB1P05556 798 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 PIM1P11309 404 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 NPR1P16066 1061 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 GCSHP23434 173 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TNFSF4P23510 183 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 CARSP49589 748 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 MTHFSP49914 203 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 MAPK10P53779 464 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 PSMC1P62191 440 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 BLOC1S1P78537 153 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 KRT17Q04695 432 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 EXOSC9Q06265 439 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 BLMHQ13867 455 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SLC29A2Q14542 456 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 IQCB1Q15051 598 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 MED25Q71SY5 747 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 RNF44Q7L0R7 432 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 GPRIN1Q7Z2K8 1008 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 UBE3BQ7Z3V4 1068 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SYTL1Q8IYJ3 562 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SPATA5Q8NB90 893 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 PCSK9Q8NBP7 692 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 NGDNQ8NEJ9 315 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 CCT6BQ92526 530 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 RAB24Q969Q5 203 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 ZNF566Q969W8 418 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 LENG9Q96B70 501 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TRIM43Q96BQ3 446 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SCLT1Q96NL6 688 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TBCBQ99426 244 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 HEPHQ9BQS7 1158 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 HERPUD2Q9BSE4 406 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 MAGEB5Q9BZ81 275 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SLC29A3Q9BZD2 475 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 DPH1Q9BZG8 443 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 IMPG2Q9BZV3 1241 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TINAGL1Q9GZM7 467 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 KCNH6Q9H252 994 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 DHX36Q9H2U1 1008 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 GSTO2Q9H4Y5 243 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 HEYLQ9NQ87 328 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 TRMT13Q9NUP7 481 aaKnown RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 KCNE5Q9UJ90 142 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 RAD54BQ9Y620 910 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SETD5Q9C0A6 1442 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SYCP2Q9BX26 1530 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 NWD1Q149M9 1564 aa3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 INO80Q9ULG1 1556 aaPredicted RBP3.08□□□□□ -1.92
RNU6-1140P-201ENST00000410517 POLR1AO95602 1720 aaPredicted RBP3.07□□□□□ -1.92
RNU6-1140P-201ENST00000410517 SIGLEC1Q9BZZ2 1709 aa3.07□□□□□ -1.92
RNU6-1140P-201ENST00000410517 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.07□□□□□ -1.92
RNU6-1140P-201ENST00000410517 LOC102723971A0A1B0GUV8 181 aa3.07□□□□□ -1.92
RNU6-1140P-201ENST00000410517 ABHD14A-ACY1A0A1B0GW23 586 aa3.07□□□□□ -1.92
RNU6-1140P-201ENST00000410517 DRGXA6NNA5 263 aa3.07□□□□□ -1.92
RNU6-1140P-201ENST00000410517 A6NNZ2 444 aa3.07□□□□□ -1.92
RNU6-1140P-201ENST00000410517 PYCARD-AS1I3L0S3 204 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms