RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TEKT4Q8WW24 435 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 ATG4AQ8WYN0 398 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 TBCBQ99426 244 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 PRDM16Q9HAZ2 1276 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 GDAP2Q9NXN4 497 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 BCCIPQ9P287 314 aaKnown RBP eCLIP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 SHOC2Q9UQ13 582 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 R3HDM2Q9Y2K5 976 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 C17orf102A2RUQ5 167 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 GOLGA8SH3BPF8 625 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 DNALI1O14645 258 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 IGHA2P01877 340 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 ACADSBP45954 432 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 MAGOHP61326 146 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 NR1H3Q13133 447 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 STAT4Q14765 748 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 PDK2Q15119 407 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 OASLQ15646 514 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 PTGISQ16647 500 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 SV2CQ496J9 727 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 FAM102AQ5T9C2 384 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 IZUMO3Q5VZ72 239 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 TMEM110Q86TL2 294 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 HACE1Q8IYU2 909 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 CRYBG2Q8N1P7 616 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 OR2W6PQ8NHA6 318 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 SLC35B2Q8TB61 432 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 TWNKQ96RR1 684 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 HERPUD2Q9BSE4 406 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 SLC4A5Q9BY07 1137 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 FAM49AQ9H0Q0 323 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 CDC42EP4Q9H3Q1 356 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 HMX1Q9NP08 348 aaPredicted RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 METTL5Q9NRN9 209 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 SNTG2Q9NY99 539 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 CYTH4Q9UIA0 394 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 TSPAN16Q9UKR8 245 aa14.25□□□□□ -0.13
LIMS1-205ENST00000410093 TPX2Q9ULW0 747 aaKnown RBP14.25□□□□□ -0.13
LIMS1-205ENST00000410093 C3orf70A6NLC5 250 aaPredicted RBP14.24□□□□□ -0.13
LIMS1-205ENST00000410093 APOC4-APOC2K7ER74 178 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 PIRO00625 290 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 TP73O15350 636 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 TRUB2O95900 331 aaKnown RBP14.24□□□□□ -0.13
LIMS1-205ENST00000410093 APOC2P02655 101 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 GJC1P36383 396 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 ATP1A2P50993 1020 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 SNX17Q15036 470 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 PKDCCQ504Y2 493 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 FBXO47Q5MNV8 452 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 C9orf57Q5W0N0 161 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 KCTD6Q8NC69 237 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 RAPGEF5Q92565 580 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 CFAP57Q96MR6 1250 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 USP18Q9UMW8 372 aa14.24□□□□□ -0.13
LIMS1-205ENST00000410093 C2CD4BA6NLJ0 364 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 NDUFAB1O14561 156 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 CAND2O75155 1236 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 DUSP11O75319 330 aaKnown RBP14.23□□□□□ -0.13
LIMS1-205ENST00000410093 ZNF189O75820 626 aaPredicted RBP14.23□□□□□ -0.13
LIMS1-205ENST00000410093 ENDOD1O94919 500 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 GJB6O95452 261 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 FAM107AO95990 144 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 AKR1A1P14550 325 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 TSHRP16473 764 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 PAX3P23760 479 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 STIP1P31948 543 aaKnown RBP14.23□□□□□ -0.13
LIMS1-205ENST00000410093 HPDP32754 393 aaPredicted RBP14.23□□□□□ -0.13
LIMS1-205ENST00000410093 MMP13P45452 471 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 C4orf22Q6V702 233 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 LIMS2Q7Z4I7 341 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 RSPH3Q86UC2 560 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 CCDC25Q86WR0 208 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 JOSD2Q8TAC2 188 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 TNIP3Q96KP6 325 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 PPP1R16BQ96T49 567 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 OSMRQ99650 979 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 MAK16Q9BXY0 300 aaKnown RBP14.23□□□□□ -0.13
LIMS1-205ENST00000410093 AAASQ9NRG9 546 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 DNPEPQ9ULA0 475 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 SNX9Q9Y5X1 595 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 ACTL7BQ9Y614 415 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 DOCK3Q8IZD9 2030 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 BRCA2P51587 3418 aa14.23□□□□□ -0.13
LIMS1-205ENST00000410093 SCN1AP35498 2009 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 CFAP69A5D8W1 941 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 GMNCA6NCL1 334 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 PI4K2BG5E9Z4 385 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 M0QZ92 97 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 ADCY6O43306 1168 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 PRPSAP2O60256 369 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 RECQL4O94761 1208 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 KRT10P13645 584 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 MIPP30301 263 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 RPL34P49207 117 aaKnown RBP14.22□□□□□ -0.13
LIMS1-205ENST00000410093 ARSEP51690 589 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 BCAT1P54687 386 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 SLC8A3P57103 927 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms