RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SYT8Q8NBV8 401 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 TBC1D22AQ8WUA7 517 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 KIAA1683Q9H0B3 1180 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 C11orf54Q9H0W9 315 aaPredicted RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 ARGLU1Q9NWB6 273 aaPredicted RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 NTMQ9P121 344 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 CEP72Q9P209 647 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 RBPJLQ9UBG7 517 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 DAPP1Q9UN19 280 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 DERAQ9Y315 318 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 SNX8Q9Y5X2 465 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 ACTL7AQ9Y615 435 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 CCDC78A2IDD5 438 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 E7EVH7 732 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 GTPBP1O00178 669 aaKnown RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 AP3D1O14617 1153 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 KIAA0355O15063 1070 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 GRM6O15303 877 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 DNAJB5O75953 348 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 NTSR2O95665 410 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 MLYCDO95822 493 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 ADRB2P07550 413 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 HNRNPCP07910 306 aaKnown RBP eCLIP5.46□□□□□ -1.54
LSM5-205ENST00000409952 GJB1P08034 283 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 MTHFD1P11586 935 aaKnown RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 FPR1P21462 350 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 MCM2P49736 904 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 UCP3P55916 312 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 GALNT2Q10471 571 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 SMAD4Q13485 552 aaKnown RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 FAXCQ5TGI0 409 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 DPP8Q6V1X1 898 aaPredicted RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 ZNF761Q86XN6 746 aaPredicted RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 DTX3Q8N9I9 347 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 IL17RDQ8NFM7 739 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 FEZF2Q8TBJ5 459 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 CPT1CQ8TCG5 803 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 AFAP1L1Q8TED9 768 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 NKD2Q969F2 451 aaPredicted RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 C3orf49Q96BT1 292 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 CDHR1Q96JP9 859 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 UIMC1Q96RL1 719 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 SPATA25Q9BR10 227 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 ADPGKQ9BRR6 497 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 PACSIN1Q9BY11 444 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 MS4A7Q9GZW8 240 aaPredicted RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 PDCL3Q9H2J4 239 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 SYNCQ9H7C4 482 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 CHODLQ9H9P2 273 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 EIF2B3Q9NR50 452 aaKnown RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 ZNF112Q9UJU3 913 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 ZHX1Q9UKY1 873 aaPredicted RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 C19orf53Q9UNZ5 99 aaPredicted RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 RUVBL1Q9Y265 456 aaKnown RBP5.46□□□□□ -1.54
LSM5-205ENST00000409952 PASKQ96RG2 1323 aa5.46□□□□□ -1.54
LSM5-205ENST00000409952 LOC102723971A0A1B0GUV8 181 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 hCG_1807616A0A1W2PRN6 198 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 ITGA10O75578 1167 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 KRT38O76015 456 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 HSPA1AP0DMV8 641 aaKnown RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 HSPA1BP0DMV9 641 aaKnown RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 ZNF28P17035 718 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 IL11P20809 199 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 MST1P26927 711 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 ATICP31939 592 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 PSMC2P35998 433 aaKnown RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 MLH1P40692 756 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 CPT1AP50416 773 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 SP140Q13342 867 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 ARHGEF7Q14155 803 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 GPR68Q15743 365 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 TBC1D10BQ4KMP7 808 aaPredicted RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 CTXN3Q4LDR2 81 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 TTC22Q5TAA0 569 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 NAA35Q5VZE5 725 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 PLAG1Q6DJT9 500 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 MFSD5Q6N075 450 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 CPLX4Q7Z7G2 160 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 GALNT13Q8IUC8 556 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 BCL6BQ8N143 479 aaPredicted RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 NDUFAF2Q8N183 169 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 LILRA3Q8N6C8 439 aaPredicted RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 REPS2Q8NFH8 660 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 FBXO18Q8NFZ0 1043 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 ADAMTS17Q8TE56 1095 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 SMCR8Q8TEV9 937 aaPredicted RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 ATRIPQ8WXE1 791 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 STON2Q8WXE9 905 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 DDX17Q92841 729 aaKnown RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 TEPSINQ96N21 525 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 PPP1R9BQ96SB3 815 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 TMEM209Q96SK2 561 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 YME1L1Q96TA2 773 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 CPEB1Q9BZB8 566 aaKnown RBP5.45□□□□□ -1.54
LSM5-205ENST00000409952 ZBTB26Q9HCK0 441 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 DLL4Q9NR61 685 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 MOCS1Q9NZB8 636 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 ARHGAP20Q9P2F6 1191 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 DNAJC16Q9Y2G8 782 aa5.45□□□□□ -1.54
LSM5-205ENST00000409952 ZNF711Q9Y462 761 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms