RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SENP6Q9GZR1 1112 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 PALMDQ9NP74 551 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 ANAPC5Q9UJX4 755 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 NEU2Q9Y3R4 380 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 FAM32AQ9Y421 112 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 CFAP69A5D8W1 941 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 H3BNX3 289 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 hCG_1984214I3L0E3 225 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CCNT2O60583 730 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CNMDO75829 334 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 XRCC5P13010 732 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 EN2P19622 333 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CHKAP35790 457 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 PPARGP37231 505 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 GALK1P51570 392 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 NUP107P57740 925 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 PFKPQ01813 784 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 KRT17Q04695 432 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF211Q13398 564 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 BMT2Q1RMZ1 405 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF423Q2M1K9 1284 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 MMEL1Q495T6 779 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 SBK1Q52WX2 424 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 KRT79Q5XKE5 535 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 THOC7Q6I9Y2 204 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 LRRC8BQ6P9F7 803 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 OLFML1Q6UWY5 402 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF410Q86VK4 478 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CCDC25Q86WR0 208 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ULK2Q8IYT8 1036 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF713Q8N859 430 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 LSM14AQ8ND56 463 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ZFP28Q8NHY6 868 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 EFHD2Q96C19 240 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 PORCNQ9H237 461 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 RPAP3Q9H6T3 665 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 KCNK13Q9HB14 408 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 KIAA1586Q9HCI6 787 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 KCNK4Q9NYG8 393 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 MORF4L1Q9UBU8 362 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 GRID1Q9ULK0 1009 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 EXOC7Q9UPT5 735 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 SQORQ9Y6N5 450 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 KDM3AQ9Y4C1 1321 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 EML1O00423 815 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 HGSO14964 777 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 BAIAP3O94812 1187 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 OR6B1O95007 311 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 DLDP09622 509 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 DHRS4L1P0CG22 281 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 PTPN2P17706 415 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 GCAP28676 217 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 COPB2P35606 906 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 TECP42680 631 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CDK9P50750 372 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 KCNC4Q03721 635 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 BTKQ06187 659 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 NADK2Q4G0N4 442 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ANO5Q75V66 913 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 TREML1Q86YW5 311 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ZCCHC9Q8N567 271 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CCDC89Q8N998 374 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 CATSPER1Q8NEC5 780 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 MTBPQ96DY7 904 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 LRGUKQ96M69 825 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 FAM161BQ96MY7 647 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 UNKQ9C0B0 810 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 C6orf50Q9HD87 102 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 NPHS2Q9NP85 383 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 ARHGEF38Q9NXL2 777 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 TAGLN3Q9UI15 199 aa11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-204ENST00000409357 A0A088AWK7 358 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 C15orf38-AP3S2A0A0A6YYH1 394 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 B2RBV5 119 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 CALUO43852 315 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 CLASP2O75122 1294 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 LGR5O75473 907 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 CAPNS1P04632 268 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 GZMAP12544 262 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 ACTN1P12814 892 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 EEF2P13639 858 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 ATF2P15336 505 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 CHRNB2P17787 502 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 TNFAIP3P21580 790 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 SLC5A2P31639 672 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 GRK4P32298 578 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 RPA3P35244 121 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 HSPA13P48723 471 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 ITGA8P53708 1063 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 GPC5P78333 572 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 KRT81Q14533 505 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms