RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 TMEM63BQ5T3F8 832 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 SCUBE3Q8IX30 993 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 GBP7Q8N8V2 638 aaPredicted RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 DNAAF3Q8N9W5 541 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 PIWIL1Q96J94 861 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 EBF4Q9BQW3 602 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 RNPEPL1Q9HAU8 725 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 TBC1D22BQ9NU19 505 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 ZNF358Q9NW07 568 aa8.7□□□□□ -1.02
SNX13-201ENST00000409076 CNOT7Q9UIV1 285 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 MYH9P35579 1960 aaKnown RBP8.7□□□□□ -1.02
SNX13-201ENST00000409076 E5RJQ4 531 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 DNAJC6O75061 913 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 VTNP04004 478 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 ICAM1P05362 532 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 ATP4AP20648 1035 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 RBL1P28749 1068 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 BCAR1P56945 870 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 BPIFB4P59827 614 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 CRYMQ14894 314 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNX13-201ENST00000409076 ZNF667Q5HYK9 610 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 RAPH1Q70E73 1250 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 TNS4Q8IZW8 715 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 GSTCDQ8NEC7 633 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 OR6B3Q8NGW1 331 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 PPP4R1Q8TF05 950 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 RIT2Q99578 217 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 XPNPEP1Q9NQW7 623 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 TMPRSS4Q9NRS4 437 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 CACNG4Q9UBN1 327 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 C2CD2Q9Y426 696 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 SCINQ9Y6U3 715 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 NAV1Q8NEY1 1877 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 MYPNQ86TC9 1320 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 DOCK2Q92608 1830 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 GOLGA8CPA6NN73 597 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 NME5P56597 212 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 ZNF200P98182 395 aaPredicted RBP8.69□□□□□ -1.02
SNX13-201ENST00000409076 CYTH1Q15438 398 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 TRIP10Q15642 601 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 EEF1DP3Q658K8 133 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 TRMT10BQ6PF06 316 aaKnown RBP8.69□□□□□ -1.02
SNX13-201ENST00000409076 FAM160B2Q86V87 743 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 GMCL1P1Q8NEA9 526 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 STK32AQ8WU08 396 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 SNRNP27Q8WVK2 155 aaKnown RBP8.69□□□□□ -1.02
SNX13-201ENST00000409076 RNPEPQ9H4A4 650 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 IRAK4Q9NWZ3 460 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 DDX60LQ5H9U9 1706 aaKnown RBP8.69□□□□□ -1.02
SNX13-201ENST00000409076 CXorf49A8MYA2 514 aaPredicted RBP8.69□□□□□ -1.02
SNX13-201ENST00000409076 WNT10BO00744 389 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 PEX11AO75192 247 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 VNN1O95497 513 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 EDN1P05305 212 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 TPH1P17752 444 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 CALB2P22676 271 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 MIPP30301 263 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 SERPINB5P36952 375 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 CXCR3P49682 368 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 KRT76Q01546 638 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 SATB1Q01826 763 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 ACAP1Q15027 740 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 CCNG2Q16589 344 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 TFDP3Q5H9I0 405 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 TATDN1Q6P1N9 297 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 CTU1Q7Z7A3 348 aaKnown RBP8.69□□□□□ -1.02
SNX13-201ENST00000409076 ACOT1Q86TX2 421 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 AZIN2Q96A70 460 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 SYT15Q9BQS2 421 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 CADM1Q9BY67 442 aaKnown RBP8.69□□□□□ -1.02
SNX13-201ENST00000409076 TXLNGYQ9BZA5 131 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 SNX9Q9Y5X1 595 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 V9GYQ6 96 aa8.69□□□□□ -1.02
SNX13-201ENST00000409076 HMGCRP04035 888 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 PRKCBP05771 671 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 PAEPP09466 180 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 ZBTB48P10074 688 aaPredicted RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 FGFR3P22607 806 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 MAPK10P53779 464 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 VCPP55072 806 aaKnown RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 GPX6P59796 221 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 GTF2BQ00403 316 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 TRAF1Q13077 416 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 GEN1Q17RS7 908 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 PTPN20Q4JDL3 420 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 ACSBG2Q5FVE4 666 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 RALGPS1Q5JS13 557 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 IYDQ6PHW0 289 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 MOXD1Q6UVY6 613 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CDHR3Q6ZTQ4 885 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 FAM131BQ86XD5 332 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 CCNYL1Q8N7R7 359 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 BBOF1Q8ND07 529 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 OLIG1Q8TAK6 271 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 SRPK1Q96SB4 655 aaKnown RBP8.68□□□□□ -1.02
SNX13-201ENST00000409076 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
SNX13-201ENST00000409076 NUMBLQ9Y6R0 609 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms