RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 TRIM60Q495X7 471 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 EFHC1Q5JVL4 640 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 FAM171BQ6P995 826 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 CD300LGQ6UXG3 332 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 OSTM1Q86WC4 334 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 RCOR2Q8IZ40 523 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 SCML4Q8N228 414 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM130Q8N3G9 435 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 C12orf29Q8N999 325 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 EIF1ADQ8N9N8 165 aaKnown RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 EXD1Q8NHP7 514 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 UBA3Q8TBC4 463 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 MYCBPAPQ8TBZ2 947 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 RBM41Q96IZ5 413 aaKnown RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 RNPC3Q96LT9 517 aaKnown RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 SYT15Q9BQS2 421 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 GOLPH3Q9H4A6 298 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 SLITRK6Q9H5Y7 841 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 ZNF576Q9H609 170 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 PNPLA8Q9NP80 782 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 PRDM5Q9NQX1 630 aaPredicted RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 HOMER3Q9NSC5 361 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM39AQ9NV64 488 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 TBC1D13Q9NVG8 400 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 MTUS1Q9ULD2 1270 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 EFR3BQ9Y2G0 817 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 INPP5FQ9Y2H2 1132 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 TANC1Q9C0D5 1861 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 CCDC151A5D8V7 595 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM110-MUSTN1A8MSY1 372 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 KIAA0355O15063 1070 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 RNF8O76064 485 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 DDHD2O94830 711 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 OAZ2O95190 189 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 ZRANB2O95218 330 aaKnown RBP eCLIP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 ALDH2P05091 517 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 FAM200BP0CF97 657 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 NPR3P17342 541 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 SSTR3P32745 418 aaPredicted RBP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 PTPN7P35236 360 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 ZNF143P52747 638 aaPredicted RBP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 TSPY1Q01534 308 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 SMARCB1Q12824 385 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 ORC1Q13415 861 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 OR6B2Q6IFH4 312 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 PMF1Q6P1K2 205 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 CC2D1AQ6P1N0 951 aaPredicted RBP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 SLC26A9Q7LBE3 791 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 MAATS1Q7Z4T9 603 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 ALYREFQ86V81 257 aaKnown RBP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 VSIG1Q86XK7 387 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 FUKQ8N0W3 1084 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 LRRN4CLQ8ND94 238 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 C3orf58Q8NDZ4 430 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 CCDC26Q8TAB7 109 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 SLC2A14Q8TDB8 520 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 HNRNPLLQ8WVV9 542 aaKnown RBP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.3□□□□□ -0.76
POLR1A-202ENST00000409024 ALG3Q92685 438 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 CASD1Q96PB1 797 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 MCEEQ96PE7 176 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 PSMB7Q99436 277 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 CNPY3Q9BT09 278 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 DPEP3Q9H4B8 488 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 CSNK1G1Q9HCP0 422 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
POLR1A-202ENST00000409024 TDRD15B5MCY1 1934 aaKnown RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 E5RJQ4 531 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 KRIT1O00522 736 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 FSCN2O14926 492 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 ATP8B1O43520 1251 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 ERLIN1O75477 346 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 TADA2AO75478 443 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 TIMP1P01033 207 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 FGGP02679 453 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 H2AFXP16104 143 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 GPD1P21695 349 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 DNAJB2P25686 324 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 PSMA2P25787 234 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 TNFRSF8P28908 595 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 RFC1P35251 1148 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 RPL7AP62424 266 aaKnown RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 YWHAHQ04917 246 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 CYP1B1Q16678 543 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 LONRF2Q1L5Z9 754 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 INTS6LQ5JSJ4 861 aaKnown RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 FAM102AQ5T9C2 384 aaPredicted RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 CYP4A22Q5TCH4 519 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 DCAF12L1Q5VU92 463 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 OVOS1Q6IE37 1185 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 OLFML1Q6UWY5 402 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 C4orf50Q6ZRC1 276 aa10.29□□□□□ -0.76
POLR1A-202ENST00000409024 DCP1BQ8IZD4 617 aaKnown RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 NOA1Q8NC60 698 aaKnown RBP10.29□□□□□ -0.76
POLR1A-202ENST00000409024 KRT35Q92764 455 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms