RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 STKLD1Q8NE28 680 aa35.18■■■■□ 3.22
CSNK1E-204ENST00000403904 SLC35F5Q8WV83 523 aa35.18■■■■□ 3.22
CSNK1E-204ENST00000403904 C8orf48Q96LL4 319 aa35.18■■■■□ 3.22
CSNK1E-204ENST00000403904 DPP7Q9UHL4 492 aa35.18■■■■□ 3.22
CSNK1E-204ENST00000403904 RFPL2O75678 378 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 GLP2RO95838 553 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 SETSIPP0DME0 302 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 ANXA13P27216 316 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 EIF4A3P38919 411 aaKnown RBP35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 RPL10AP62906 217 aaKnown RBP35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 C1orf131Q8NDD1 294 aaKnown RBP35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 HDAC7Q8WUI4 952 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 CYTH4Q9UIA0 394 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 CEP83Q9Y592 693 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 XPO1O14980 1071 aaKnown RBP35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 CDK17Q00537 523 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 PIGZQ86VD9 579 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 GIPC2Q8TF65 315 aa35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP35.17■■■■□ 3.22
CSNK1E-204ENST00000403904 SPDYE4A6NLX3 237 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 ZMYND10O75800 440 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 FOSL2P15408 326 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 PPM1LQ5SGD2 360 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 PMF1Q6P1K2 205 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 TMEM35BQ8NCS4 154 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 CASP10Q92851 521 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 ADAMTS1Q9UHI8 967 aa35.16■■■■□ 3.22
CSNK1E-204ENST00000403904 XIRP2A4UGR9 3374 aa35.15■■■■□ 3.22
CSNK1E-204ENST00000403904 CYP1A1P04798 512 aaPredicted RBP35.15■■■■□ 3.22
CSNK1E-204ENST00000403904 RGS7P49802 495 aa35.15■■■■□ 3.22
CSNK1E-204ENST00000403904 ADAM15Q13444 863 aa35.15■■■■□ 3.22
CSNK1E-204ENST00000403904 ELMSAN1Q6PJG2 1045 aa35.15■■■■□ 3.22
CSNK1E-204ENST00000403904 CPA5Q8WXQ8 436 aa35.15■■■■□ 3.22
CSNK1E-204ENST00000403904 NHEJ1Q9H9Q4 299 aaPredicted RBP35.15■■■■□ 3.22
CSNK1E-204ENST00000403904 PATJQ8NI35 1801 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 HHLA1C9JL84 531 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 DDX3XO00571 662 aaKnown RBP eCLIP35.14■■■■□ 3.225e-13■■■■□ 24.3
CSNK1E-204ENST00000403904 LSM8O95777 96 aaKnown RBP35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 LRG1P02750 347 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 CDH5P33151 784 aaPredicted RBP35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 PLA2G4AP47712 749 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 NOMO3P69849 1222 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 NAA35Q5VZE5 725 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 TRIM72Q6ZMU5 477 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 VPS36Q86VN1 386 aa35.14■■■■□ 3.22
CSNK1E-204ENST00000403904 MAPK8IP2Q13387 824 aaPredicted RBP35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 TMEM184AQ6ZMB5 413 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 RTL10Q7L3V2 364 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 GPRIN1Q7Z2K8 1008 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 SLC30A5Q8TAD4 765 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 SPATA17Q96L03 361 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 UBXN6Q9BZV1 441 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 DEF6Q9H4E7 631 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 ST7Q9NRC1 585 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 SSU72P8A0A1W2PR75 194 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 UNGP13051 313 aaPredicted RBP35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 FECHP22830 423 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 EPHB3P54753 998 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 CCDC85BQ15834 202 aaPredicted RBP35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 CLEC16AQ2KHT3 1053 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 CYP26C1Q6V0L0 522 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 C12orf76Q8N812 135 aaPredicted RBP35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 CCDC42Q96M95 316 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 BAG1Q99933 345 aaPredicted RBP35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 PNPLA8Q9NP80 782 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 GREB1Q4ZG55 1949 aa35.13■■■■□ 3.21
CSNK1E-204ENST00000403904 TNFRSF10BO14763 440 aa35.12■■■■□ 3.21
CSNK1E-204ENST00000403904 CCL16O15467 120 aa35.12■■■■□ 3.21
CSNK1E-204ENST00000403904 PDCLQ13371 301 aa35.12■■■■□ 3.21
CSNK1E-204ENST00000403904 PLD1Q13393 1074 aa35.12■■■■□ 3.21
CSNK1E-204ENST00000403904 MTMR3Q13615 1198 aa35.12■■■■□ 3.21
CSNK1E-204ENST00000403904 CLDND1Q9NY35 253 aa35.12■■■■□ 3.21
CSNK1E-204ENST00000403904 PRUNE2Q8WUY3 3088 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 A0A087X0T9 212 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 PIK3R2O00459 728 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 FAM228BP0C875 321 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 SRGAP2BP0DMP2 458 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 SLC5A3P53794 718 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 CCDC173Q0VFZ6 552 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 CTC1Q2NKJ3 1217 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 ASTE1Q2TB18 679 aaPredicted RBP35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 EP400NLQ6ZTU2 488 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 DENND5BQ6ZUT9 1274 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 TMEM139Q8IV31 216 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 SCAMP5Q8TAC9 235 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 DZANK1Q9NVP4 752 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 ZDHHC7Q9NXF8 308 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 TAS2R14Q9NYV8 317 aa35.11■■■■□ 3.21
CSNK1E-204ENST00000403904 CCDC195A0A1B0GUA6 201 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 TMCO5BA8MYB1 307 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 IFRD2Q12894 506 aaPredicted RBP35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 VEPH1Q14D04 833 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 NUP93Q8N1F7 819 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 FEZF2Q8TBJ5 459 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 STK32AQ8WU08 396 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 HSFY1Q96LI6 401 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 NOX5Q96PH1 765 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 CPXM1Q96SM3 734 aa35.1■■■■□ 3.21
CSNK1E-204ENST00000403904 SLC38A8A6NNN8 435 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 NCK2O43639 380 aa35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms