RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 BBS5Q8N3I7 341 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 KCTD6Q8NC69 237 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ZNF420Q8TAQ5 688 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 QKIQ96PU8 341 aaKnown RBP eCLIP10.35□□□□□ -0.756e-7■■■■□ 23.5
PTPRM-203ENST00000400060 EBF3Q9H4W6 596 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 TFCP2L1Q9NZI6 479 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 PCDHA6Q9UN73 950 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ZNF510Q9Y2H8 683 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 PCDHA8Q9Y5H6 950 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ABL1P00519 1130 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ROR1Q01973 937 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 NTRK3Q16288 839 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 KLHL12Q53G59 568 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 SUPT20HQ8NEM7 779 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 RASGRP4Q8TDF6 673 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 DACT3Q96B18 629 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 C8orf37Q96NL8 207 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 SLC13A1Q9BZW2 595 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 TRPV5Q9NQA5 729 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 CCNL1Q9UK58 526 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 AURKCQ9UQB9 309 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 CHKBQ9Y259 395 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ZC3H4Q9UPT8 1303 aaKnown RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 FANCGO15287 622 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 MED7O43513 233 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 DDHD2O94830 711 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 COPB2P35606 906 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 GSSP48637 474 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ACSBG2Q5FVE4 666 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 NLRP10Q86W26 655 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 SLC26A11Q86WA9 606 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 HEATR4Q86WZ0 1026 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 PALB2Q86YC2 1186 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 CDKL3Q8IVW4 592 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-203ENST00000400060 LCORLQ8N3X6 602 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 FBXW8Q8N3Y1 598 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 TCP10LQ8TDR4 215 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 GLMNQ92990 594 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ARHGEF26Q96DR7 871 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 HEMGNQ9BXL5 484 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 TTYH3Q9C0H2 523 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 CDH19Q9H159 772 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 PARVAQ9NVD7 372 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 STK39Q9UEW8 545 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 PTPRUQ92729 1446 aa10.35□□□□□ -0.75
PTPRM-203ENST00000400060 ERVV-1B6SEH8 477 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 CLDN25C9JDP6 229 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 KATNA1O75449 491 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 ANKMY2Q8IV38 441 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 OSCP1Q8WVF1 389 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 NACC1Q96RE7 527 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 SEMA6BQ9H3T3 888 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 FANCEQ9HB96 536 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 MST1RQ04912 1400 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 SNPHO15079 494 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 RECQLP46063 649 aaPredicted RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 FMO5P49326 533 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 CHRNDQ07001 517 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 PRPSAP1Q14558 356 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 FAM47AQ5JRC9 791 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 MIIPQ5JXC2 388 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 ODR4Q5SWX8 454 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 BAP1Q92560 729 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 KRT35Q92764 455 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 HAPLN3Q96S86 360 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 NUDT12Q9BQG2 462 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 RPRD1BQ9NQG5 326 aaKnown RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 VTI1BQ9UEU0 232 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 IPO11Q9UI26 975 aaKnown RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 SERPINB13Q9UIV8 391 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 TMEM59LQ9UK28 342 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 PTBP2Q9UKA9 531 aaKnown RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 ERVK-11Q9UQG0 969 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 SPEF1Q9Y4P9 236 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 PCDHA3Q9Y5H8 950 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 HEATR9A2RTY3 570 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 PDZK1P1A8MUH7 402 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 CLIC2O15247 247 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 FARP2O94887 1054 aaPredicted RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 ENO2P09104 434 aaPredicted RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 RALBP11234 206 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 CYP2C9P11712 490 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 P4HA1P13674 534 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 RAB25P57735 213 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 RUNX1T1Q06455 604 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 PDCD6IPQ8WUM4 868 aaKnown RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 C10orf82Q8WW14 230 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 DHX38Q92620 1227 aaKnown RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 HDAC11Q96DB2 347 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 TMA16Q96EY4 203 aaKnown RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 YTHDF1Q9BYJ9 559 aaKnown RBP10.34□□□□□ -0.75
PTPRM-203ENST00000400060 C1orf21Q9H246 121 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 TAS2R1Q9NYW7 299 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 FETUBQ9UGM5 382 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 SNX13Q9Y5W8 968 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 CLOCKO15516 846 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 PRLP01236 227 aa10.34□□□□□ -0.75
PTPRM-203ENST00000400060 FASP25445 335 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms