RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 IMPACTQ9P2X3 320 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 HESX1Q9UBX0 185 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 NOCTQ9UK39 431 aaKnown RBP7.96□□□□□ -1.13
USP16-204ENST00000399976 PCDHB4Q9Y5E5 795 aa7.96□□□□□ -1.13
USP16-204ENST00000399976 CCDC195A0A1B0GUA6 201 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 SERPINC1P01008 464 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 CYP1A1P04798 512 aaPredicted RBP7.96□□□□□ -1.14
USP16-204ENST00000399976 IBSPP21815 317 aaPredicted RBP7.96□□□□□ -1.14
USP16-204ENST00000399976 ARHGAP15Q53QZ3 475 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 SPECC1LQ69YQ0 1117 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 TMEM110Q86TL2 294 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 SMG7Q92540 1137 aaKnown RBP7.96□□□□□ -1.14
USP16-204ENST00000399976 ELSPBP1Q96BH3 223 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 B3GALT6Q96L58 329 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 TMEM209Q96SK2 561 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 DNAJC7Q99615 494 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 RETREG1Q9H6L5 497 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 CDH7Q9ULB5 785 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 USP15Q9Y4E8 981 aaPredicted RBP7.96□□□□□ -1.14
USP16-204ENST00000399976 FHOD1Q9Y613 1164 aa7.96□□□□□ -1.14
USP16-204ENST00000399976 LINC01565O15544 149 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 WEE2P0C1S8 567 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 GZMAP12544 262 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 CLCN1P35523 988 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 CDH8P55286 799 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 SLC7A9P82251 487 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 CDR2Q01850 454 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 TWF1Q12792 350 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 MAPK8IP2Q13387 824 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 DRAP1Q14919 205 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 TCEAL1Q15170 157 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 TJAP1Q5JTD0 557 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 DENND5BQ6ZUT9 1274 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 ZMIZ2Q8NF64 920 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 RABGGTAQ92696 567 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 AZIN2Q96A70 460 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 EEF2KMTQ96G04 330 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 NOX5Q96PH1 765 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 GCNAQ96QF7 691 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 SMOQ99835 787 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 DPEP3Q9H4B8 488 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 WDR35Q9P2L0 1181 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 GTF3C4Q9UKN8 822 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 TIMM13Q9Y5L4 95 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 SSU72P8A0A1W2PR75 194 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 BMP1P13497 986 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 GLULP15104 373 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 RPL17P18621 184 aaKnown RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 FSHRP23945 695 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 GNA15P30679 374 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 GPD2P43304 727 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 RAP1GAPP47736 663 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 KIF11P52732 1056 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 DUSP4Q13115 394 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 PPP1R26Q5T8A7 1209 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 TMEM270Q6UE05 265 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 ACOT1Q86TX2 421 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 MON1AQ86VX9 555 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 SLC2A14Q8TDB8 520 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 EPS8L1Q8TE68 723 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 DEPDC1BQ8WUY9 529 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 ZNF606Q8WXB4 792 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 ACSF2Q96CM8 615 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 CRISPLD1Q9H336 500 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 TASP1Q9H6P5 420 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 KRT82Q9NSB4 513 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 DNMT3BQ9UBC3 853 aaKnown RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 HMGXB4Q9UGU5 601 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 TSPAN16Q9UKR8 245 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 NENFQ9UMX5 172 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 CEP83Q9Y592 693 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 PCDHGC5Q9Y5F6 944 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 C2CD2LO14523 706 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 MOSPD3O75425 235 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 AP1G2O75843 785 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 CYP11B1P15538 503 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 KPNA1P52294 538 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 CENPCQ03188 943 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 CYP4A22Q5TCH4 519 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 DNAJB7Q7Z6W7 309 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 PHF13Q86YI8 300 aaPredicted RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 CNGA4Q8IV77 575 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 STKLD1Q8NE28 680 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 DNASE1L2Q92874 299 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 OTUB2Q96DC9 234 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 TRIM11Q96F44 468 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 HEXIM2Q96MH2 286 aaKnown RBP7.95□□□□□ -1.14
USP16-204ENST00000399976 SLITRK1Q96PX8 696 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 ARID3AQ99856 593 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 STRIP2Q9ULQ0 834 aa7.95□□□□□ -1.14
USP16-204ENST00000399976 RNF225M0QZC1 329 aaPredicted RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 OAS1P00973 400 aaKnown RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 RHOP08100 348 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 YWHAQP27348 245 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 ZP2Q05996 745 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 USP4Q13107 963 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 PTCRAQ6ISU1 281 aaPredicted RBP7.94□□□□□ -1.14
USP16-204ENST00000399976 SCARA5Q6ZMJ2 495 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 IRF2BP2Q7Z5L9 587 aa7.94□□□□□ -1.14
USP16-204ENST00000399976 PALB2Q86YC2 1186 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms