RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PPP1R14CQ8TAE6 165 aa17.83■□□□□ 0.45
PTPRA-205ENST00000399903 HACL1Q9UJ83 578 aa17.83■□□□□ 0.45
PTPRA-205ENST00000399903 FUT4P22083 530 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 YWHAGP61981 247 aaKnown RBP eCLIP17.83■□□□□ 0.44
PTPRA-205ENST00000399903 PEX6Q13608 980 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 TRMT5Q32P41 509 aaKnown RBP17.83■□□□□ 0.44
PTPRA-205ENST00000399903 ZCCHC23Q6ZST2 131 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 C1orf186Q6ZWK4 172 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 CBWD2Q8IUF1 395 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 FBXO36Q8NEA4 188 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 DEFB129Q9H1M3 183 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 BLOC1S6Q9UL45 172 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 DLDP09622 509 aaKnown RBP17.83■□□□□ 0.44
PTPRA-205ENST00000399903 TCF4P15884 667 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 VCLP18206 1134 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 GLRA2P23416 452 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 RPS6P62753 249 aaKnown RBP17.83■□□□□ 0.44
PTPRA-205ENST00000399903 HIC1Q14526 733 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 RALGPS1Q5JS13 557 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 FAM71AQ8IYT1 594 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 PLEKHO2Q8TD55 490 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 ATG4CQ96DT6 458 aa17.83■□□□□ 0.44
PTPRA-205ENST00000399903 ABHD2P08910 425 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 PHBP35232 272 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 GPX6P59796 221 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 ZNF200P98182 395 aaPredicted RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 CENPCQ03188 943 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 SMAD1Q15797 465 aaKnown RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 PLA2G4FQ68DD2 849 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 MIER3Q7Z3K6 550 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 RHOT1Q8IXI2 618 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 KIFC3Q9BVG8 833 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 KLHL4Q9C0H6 718 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 FEM1BQ9UK73 627 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 CYP3A4P08684 503 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 SLC1A1P43005 524 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 BASP1P80723 227 aaKnown RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 AGBL3Q8NEM8 1001 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 NT5C1BQ96P26 610 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 HAPLN3Q96S86 360 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 RPAP3Q9H6T3 665 aaPredicted RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 ARHGEF38Q9NXL2 777 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 HSPBP1Q9NZL4 362 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 C10orf71Q711Q0 1435 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 CAPN8A6NHC0 703 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 FAM155BO75949 473 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 INHBAP08476 426 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 C6orf222P0C671 652 aaPredicted RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 PDE1BQ01064 536 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 PTK7Q13308 1070 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 MSS51Q4VC12 460 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 ANKRD22Q5VYY1 191 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 ACAD11Q709F0 780 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 NET1Q7Z628 596 aaPredicted RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 RNF168Q8IYW5 571 aaPredicted RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.82■□□□□ 0.44
PTPRA-205ENST00000399903 TAS1R2Q8TE23 839 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 CNBD2Q96M20 576 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 TEPSINQ96N21 525 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 TEKT3Q9BXF9 490 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 RAB20Q9NX57 234 aa17.82■□□□□ 0.44
PTPRA-205ENST00000399903 CYB561D2O14569 222 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 ZNF189O75820 626 aaPredicted RBP17.81■□□□□ 0.44
PTPRA-205ENST00000399903 CLPTM1O96005 669 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 ACTR3P61158 418 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 MRPS9P82933 396 aaKnown RBP17.81■□□□□ 0.44
PTPRA-205ENST00000399903 TRIM67Q6ZTA4 783 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 DHDDSQ86SQ9 333 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 NLRX1Q86UT6 975 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 ZNF398Q8TD17 642 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 POMGNT1Q8WZA1 660 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 POLR3CQ9BUI4 534 aaPredicted RBP17.81■□□□□ 0.44
PTPRA-205ENST00000399903 PGAP2Q9UHJ9 254 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 MYH11P35749 1972 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 DKC1O60832 514 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTPRA-205ENST00000399903 COQ9O75208 318 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 ZMPSTE24O75844 475 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 TM7SF2O76062 418 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 KLRC2P26717 231 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 NRLP54845 237 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 FAAP100Q0VG06 881 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 NFX1Q12986 1120 aaKnown RBP17.81■□□□□ 0.44
PTPRA-205ENST00000399903 UGCGQ16739 394 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 MFSD7Q6UXD7 560 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 ICA1LQ8NDH6 482 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 CLEC4DQ8WXI8 215 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 APOL6Q9BWW8 343 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 IL1RAPL1Q9NZN1 696 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 AK5Q9Y6K8 562 aa17.81■□□□□ 0.44
PTPRA-205ENST00000399903 A0A0J9YVX5 310 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 COPEO14579 308 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 TLR3O15455 904 aaKnown RBP17.8■□□□□ 0.44
PTPRA-205ENST00000399903 CRABP2P29373 138 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 PTGER2P43116 358 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 HMGCS2P54868 508 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 CHI3L2Q15782 390 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 FNBP1LQ5T0N5 605 aa17.8■□□□□ 0.44
PTPRA-205ENST00000399903 HSPBAP1Q96EW2 488 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms