RNA–Protein interactions for RNA: ENST00000399808.4

IFITM3-201, Transcript of interferon induced transmembrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene IFITM3, Length 808 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-201ENST00000399808 COL28A1Q2UY09 1125 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 LYSMD4Q5XG99 296 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 ADALQ6DHV7 355 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 C12orf40Q86WS4 652 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 DEFB119Q8N690 84 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 WHAMMQ8TF30 809 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 GTPBP2Q9BX10 602 aaKnown RBP16.13■□□□□ 0.17
IFITM3-201ENST00000399808 RNF38Q9H0F5 515 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 AGO2Q9UKV8 859 aaKnown RBP16.13■□□□□ 0.17
IFITM3-201ENST00000399808 LAMA5O15230 3695 aa16.13■□□□□ 0.17
IFITM3-201ENST00000399808 LEFTY2O00292 366 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 SERPINF2P08697 491 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 ATP2C1P98194 919 aaPredicted RBP16.12■□□□□ 0.17
IFITM3-201ENST00000399808 KCNB1Q14721 858 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 DHCR24Q15392 516 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 DUOXA1Q1HG43 343 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 FILIP1Q7Z7B0 1213 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 SCN4BQ8IWT1 228 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 MINDY1Q8N5J2 469 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 CXorf38Q8TB03 319 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 HMGB4Q8WW32 186 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 FAM84AQ96KN4 292 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 SPACA7Q96KW9 195 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 CAMK1GQ96NX5 476 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 BBC3Q96PG8 261 aaPredicted RBP16.12■□□□□ 0.17
IFITM3-201ENST00000399808 PNKPQ96T60 521 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 PARVGQ9HBI0 331 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 POLMQ9NP87 494 aaPredicted RBP16.12■□□□□ 0.17
IFITM3-201ENST00000399808 GCN1Q92616 2671 aaKnown RBP16.12■□□□□ 0.17
IFITM3-201ENST00000399808 ASXL3Q9C0F0 2248 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 LOC400499M0QZD8 3231 aa16.12■□□□□ 0.17
IFITM3-201ENST00000399808 APC2O95996 2303 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 MYMKA6NI61 221 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 SCAMP3O14828 347 aaKnown RBP16.11■□□□□ 0.17
IFITM3-201ENST00000399808 OPHN1O60890 802 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 ATP2C2O75185 946 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 FAM13AO94988 1023 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 KAT7O95251 611 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 SCP2P22307 547 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 ADSSP30520 456 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 POLR2BP30876 1174 aaKnown RBP16.11■□□□□ 0.17
IFITM3-201ENST00000399808 HOXD12P35452 270 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 USP46P62068 366 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 POU5F1Q01860 360 aaKnown RBP16.11■□□□□ 0.17
IFITM3-201ENST00000399808 DHX8Q14562 1220 aaKnown RBP16.11■□□□□ 0.17
IFITM3-201ENST00000399808 ZNF423Q2M1K9 1284 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 HSF5Q4G112 596 aaPredicted RBP16.11■□□□□ 0.17
IFITM3-201ENST00000399808 RHBDF2Q6PJF5 856 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 GPBP1Q86WP2 473 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 PHTF2Q8N3S3 785 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 HDDC3Q8N4P3 179 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 FSIP1Q8NA03 581 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 ZSWIM2Q8NEG5 633 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 ZNF560Q96MR9 790 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 BLOC1S4Q9NUP1 217 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
IFITM3-201ENST00000399808 LIMCH1Q9UPQ0 1083 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 AGAP1Q9UPQ3 857 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 URB1O60287 2271 aaKnown RBP16.11■□□□□ 0.17
IFITM3-201ENST00000399808 SHROOM3Q8TF72 1996 aa16.11■□□□□ 0.17
IFITM3-201ENST00000399808 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 GABRDO14764 452 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 GJB3O75712 270 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 ITGB3P05106 788 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 RDXP35241 583 aaKnown RBP16.1■□□□□ 0.17
IFITM3-201ENST00000399808 DPP6P42658 865 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 ATXN3P54252 364 aaPredicted RBP16.1■□□□□ 0.17
IFITM3-201ENST00000399808 MYL7Q01449 175 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 GFPT1Q06210 699 aaPredicted RBP16.1■□□□□ 0.17
IFITM3-201ENST00000399808 EOGTQ5NDL2 527 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 SLFN12LQ6IEE8 588 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 FAM171BQ6P995 826 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 NT5DC4Q86YG4 428 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 SPATA2LQ8IUW3 424 aaPredicted RBP16.1■□□□□ 0.17
IFITM3-201ENST00000399808 PGBD3Q8N328 593 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 C1orf127Q8N9H9 656 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 CEP76Q8TAP6 659 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 SPATA18Q8TC71 538 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 ADAMTS14Q8WXS8 1223 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
IFITM3-201ENST00000399808 DNAAF2Q9NVR5 837 aaKnown RBP16.1■□□□□ 0.17
IFITM3-201ENST00000399808 TCRBV21S2A2A0A5A6 115 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 ARHGAP33O14559 1287 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 SH3BP5O60239 455 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 HUS1O60921 280 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 ZIC2O95409 532 aaPredicted RBP16.09■□□□□ 0.17
IFITM3-201ENST00000399808 APODP05090 189 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 EIF2DP41214 584 aaKnown RBP16.09■□□□□ 0.17
IFITM3-201ENST00000399808 PNPLA4P41247 253 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 MAGEA11P43364 429 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 SLC7A9P82251 487 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
IFITM3-201ENST00000399808 ZNF33AQ06730 810 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 BYSLQ13895 437 aaKnown RBP16.09■□□□□ 0.17
IFITM3-201ENST00000399808 MCM6Q14566 821 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 LMBRD2Q68DH5 695 aaPredicted RBP16.09■□□□□ 0.17
IFITM3-201ENST00000399808 CCNI2Q6ZMN8 369 aaPredicted RBP16.09■□□□□ 0.17
IFITM3-201ENST00000399808 SLC41A1Q8IVJ1 513 aa16.09■□□□□ 0.17
IFITM3-201ENST00000399808 TMEM86AQ8N2M4 240 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms