RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	ORC2	Q13416	577 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	IKBKE	Q14164	716 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CHADL	Q6NUI6	762 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PEG10	Q86TG7	708 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	LRRC8A	Q8IWT6	810 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TEX19	Q8NA77	164 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RDM1	Q8NG50	284 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CAPSL	Q8WWF8	208 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	IL17RA	Q96F46	866 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ART5	Q96L15	291 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RPRD1A	Q96P16	312 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MRPL1	Q9BYD6	325 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TMEM5	Q9Y2B1	443 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MAST1	Q9Y2H9	1570 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CCDC22	O60826	627 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SNX4	O95219	450 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GUCY1A2	P33402	732 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EIF4A3	P38919	411 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DSG1	Q02413	1049 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CLCA4	Q14CN2	919 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CYP51A1	Q16850	503 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PTRHD1	Q6GMV3	140 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TMEM270	Q6UE05	265 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ASAP3	Q8TDY4	903 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	XPNPEP3	Q9NQH7	507 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PCDHB15	Q9Y5E8	787 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ODC1	P11926	461 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	STIP1	P31948	543 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FNTA	P49354	379 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TNS3	Q68CZ2	1445 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CARD14	Q9BXL6	1004 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TMEM39B	Q9GZU3	492 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	OSGEPL1	Q9H4B0	414 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	C10orf88	Q9H8K7	445 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PCDHA10	Q9Y5I2	948 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SNTN	A6NMZ2	147 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ATP5F1	P24539	256 aa	Predicted RBP	11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ISLR2	Q6UXK2	745 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CHST13	Q8NET6	341 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SPIRE2	Q8WWL2	714 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MCRS1	Q96EZ8	462 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TASP1	Q9H6P5	420 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ADAM30	Q9UKF2	790 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CDYL	Q9Y232	598 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NUP153	P49790	1475 aa	Known RBP	11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RGS20	O76081	388 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PDGFRB	P09619	1106 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RPS6KA3	P51812	740 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	APBA1	Q02410	837 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SP3	Q02447	781 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	POLD3	Q15054	466 aa	Predicted RBP	11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	USF2	Q15853	346 aa	Predicted RBP	11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GALNTL5	Q7Z4T8	443 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TMEM35B	Q8NCS4	154 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DDHD1	Q8NEL9	900 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	GOLPH3L	Q9H4A5	285 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	AGAP1	Q9UPQ3	857 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SNX9	Q9Y5X1	595 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SLC30A1	Q9Y6M5	507 aa		11.52	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CFAP73	A6NFT4	308 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	TMEM88B	A6NKF7	163 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	TLL1	O43897	1013 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	KPNA6	O60684	536 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	FGFR2	P21802	821 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	PCSK1	P29120	753 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	NOG	Q13253	232 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	USP17L6P	Q6QN14	398 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	CARNMT1	Q8N4J0	409 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	KAT2B	Q92831	832 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	ARHGAP9	Q9BRR9	750 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	RANBP17	Q9H2T7	1088 aa	Known RBP	11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	ABCB6	Q9NP58	842 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	FHOD1	Q9Y613	1164 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	PRAG1	Q86YV5	1406 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	ALDH2	P05091	517 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	ATP6V1B2	P21281	511 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	NCAPH	Q15003	741 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	RPTN	Q6XPR3	784 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	PIK3CD	O00329	1044 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	FAM20B	O75063	409 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	NDUFS3	O75489	264 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	AP1G2	O75843	785 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	NPTXR	O95502	500 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	TPI1	P60174	286 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	C12orf60	Q5U649	245 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	EFCAB12	Q6NXP0	572 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	SOCS4	Q8WXH5	440 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	CLIP3	Q96DZ5	547 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	THUMPD3	Q9BV44	507 aa	Known RBP	11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	PACSIN1	Q9BY11	444 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	NAGPA	Q9UK23	515 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644		A0A0D9SFI3	127 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	TP73	O15350	636 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	ASNA1	O43681	348 aa		11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	MAGEA10	P43363	369 aa	Predicted RBP	11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	ABCE1	P61221	599 aa	Known RBP	11.52	□□□□□ -0.57
CACNA1C-218	ENST00000399644	MAPRE2	Q15555	327 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms