RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 PDZK1P1A8MUH7 402 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 EVPLLA8MZ36 301 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 EIF2S1P05198 315 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 PGK2P07205 417 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 CDC27P30260 824 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 MTSS1LQ765P7 747 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 KRT74Q7RTS7 529 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 INPP5DQ92835 1189 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 STK33Q9BYT3 514 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 RSPH9Q9H1X1 276 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 H7C1W4 665 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 APRTP07741 180 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 TGFB2P61812 414 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 PTGISQ16647 500 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 TMEM154Q6P9G4 183 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 NECAB2Q7Z6G3 386 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 RNPC3Q96LT9 517 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 VWA5AO00534 786 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 PDGFRAP16234 1089 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 THOP1P52888 689 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 SNAP47Q5SQN1 464 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 DDI2Q5TDH0 399 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 TRIM65Q6PJ69 517 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 CHST13Q8NET6 341 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 RANBP17Q9H2T7 1088 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 ALKBH4Q9NXW9 302 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 TBC1D3BA6NDS4 549 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 IFRD1O00458 451 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 B3GAT3O94766 335 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 KLHL2O95198 593 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 YWHAQP27348 245 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 GUCY1A3Q02108 690 aa11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.58
CACNA1C-215ENST00000399637 TEX28O15482 410 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 RASSF9O75901 435 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 TDP2O95551 362 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 H2AFXP16104 143 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 ERO1BQ86YB8 467 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CCDC60Q8IWA6 550 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CCDC134Q9H6E4 229 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 SEPT3Q9UH03 358 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 ESYT3A0FGR9 886 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 F8W810 466 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 AGTP01019 485 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CHRM3P20309 590 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 SPRP35270 261 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 PDK1Q15118 436 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 SLC25A24Q6NUK1 477 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CCDC149Q6ZUS6 474 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 EME1Q96AY2 570 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 MAGED4Q96JG8 741 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CNBD2Q96M20 576 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 DCP1AQ9NPI6 582 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 RAB6BQ9NRW1 208 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 FAM49BQ9NUQ9 324 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 TDRKHQ9Y2W6 561 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 ARL2BPQ9Y2Y0 163 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 GLRA4Q5JXX5 417 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 IPMKQ8NFU5 416 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 KCNK16Q96T55 309 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CNPPD1Q9BV87 410 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 MOV10L1Q9BXT6 1211 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 MRPS26Q9BYN8 205 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 PRRG4Q9BZD6 226 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 REXO4Q9GZR2 422 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 KLHL25Q9H0H3 589 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 LMTK2Q8IWU2 1503 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 AK9Q5TCS8 1911 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 RNF103O00237 685 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 POLBP06746 335 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 NCAM1P13591 858 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 RFC5P40937 340 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 PLOD1Q02809 727 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 DAB2IPQ5VWQ8 1189 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 MIB1Q86YT6 1006 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 SLC35G2Q8TBE7 412 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 FUCA2Q9BTY2 467 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 NMRK1Q9NWW6 199 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 UTP6Q9NYH9 597 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 WWOXQ9NZC7 414 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 HBP1O60381 514 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 NRG3P56975 720 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 POU4F1Q01851 419 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 NCOA4Q13772 614 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 TOB2Q14106 344 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 GUF1Q8N442 669 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 C12orf50Q8NA57 414 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-215ENST00000399637 PDXKO00764 312 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 ITGA3P26006 1051 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms