RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
ITSN1-208ENST00000399349 ABHD8Q96I13 439 aa13.66□□□□□ -0.22
ITSN1-208ENST00000399349 THUMPD3Q9BV44 507 aaKnown RBP13.66□□□□□ -0.22
ITSN1-208ENST00000399349 VPS33BQ9H267 617 aa13.66□□□□□ -0.22
ITSN1-208ENST00000399349 ZC4H2Q9NQZ6 224 aa13.66□□□□□ -0.22
ITSN1-208ENST00000399349 POLR1AO95602 1720 aaPredicted RBP13.66□□□□□ -0.22
ITSN1-208ENST00000399349 MYO3AQ8NEV4 1616 aa13.66□□□□□ -0.22
ITSN1-208ENST00000399349 EPB42P16452 691 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 VPS72Q15906 364 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 TFDP3Q5H9I0 405 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 VPS50Q96JG6 964 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 YIPF2Q9BWQ6 316 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SEMA4AQ9H3S1 761 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SYNDIG1Q9H7V2 258 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 DAB1O75553 588 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 HARS2P49590 506 aaKnown RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 PKN1Q16512 942 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 FAM83EQ2M2I3 478 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 DEPDC1Q5TB30 811 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 MEI1Q5TIA1 1274 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 CCDC81Q6ZN84 652 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 ZNF720Q7Z2F6 126 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SMAD5Q99717 465 aaKnown RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 PIH1D1Q9NWS0 290 aaKnown RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 CRLS1Q9UJA2 301 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 TMEM150BA6NC51 233 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 KDM1AO60341 852 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SOAT1P35610 550 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 PTK6Q13882 451 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 BTN2A2Q8WVV5 523 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 ILKAPQ9H0C8 392 aaPredicted RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SPASTQ9UBP0 616 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 PRR23AA6NEV1 266 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SLC26A4O43511 780 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 CLASP2O75122 1294 aaKnown RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SREBF1P36956 1147 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 MAP3K10Q02779 954 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 LAMC2Q13753 1193 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 SLC5A5Q92911 643 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 CNBD2Q96M20 576 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 UBQLN1Q9UMX0 589 aaKnown RBP13.65□□□□□ -0.22
ITSN1-208ENST00000399349 ABCA6Q8N139 1617 aa13.65□□□□□ -0.22
ITSN1-208ENST00000399349 TBC1D4O60343 1298 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 RARGP13631 454 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 THPOP40225 353 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
ITSN1-208ENST00000399349 CDKAL1Q5VV42 579 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 PAPD7Q5XG87 772 aaKnown RBP13.64□□□□□ -0.23
ITSN1-208ENST00000399349 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 TATDN2Q93075 761 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 WDR47O94967 919 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 ARIH2O95376 493 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 MTFR1Q15390 333 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 MICU2Q8IYU8 434 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 KIAA0895Q8NCT3 520 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 ACTL9Q8TC94 416 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 HDAC7Q8WUI4 952 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 PAFAH2Q99487 392 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 ECSITQ9BQ95 431 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 C17orf75Q9HAS0 396 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 CISHQ9NSE2 258 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 PXDNLA1KZ92 1463 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 PSTPIP1O43586 416 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 MIER2Q8N344 545 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 RAB42Q8N4Z0 105 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 ZMAT2Q96NC0 199 aaKnown RBP13.64□□□□□ -0.23
ITSN1-208ENST00000399349 ZNF556Q9HAH1 456 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 CAPN10Q9HC96 672 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 MAP2K7O14733 419 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 CDH2P19022 906 aaPredicted RBP13.64□□□□□ -0.23
ITSN1-208ENST00000399349 STKLD1Q8NE28 680 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 SPON1Q9HCB6 807 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 IARS2Q9NSE4 1012 aaKnown RBP13.64□□□□□ -0.23
ITSN1-208ENST00000399349 RAB21Q9UL25 225 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 CDC42BPBQ9Y5S2 1711 aa13.64□□□□□ -0.23
ITSN1-208ENST00000399349 C16orf96A6NNT2 1141 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 KBTBD13C9JR72 458 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 SMAPO00193 183 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 TSPAN3O60637 253 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 JCHAINP01591 159 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 KCNA4P22459 653 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 MZF1P28698 734 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-208ENST00000399349 CLK1P49759 484 aaKnown RBP13.63□□□□□ -0.23
ITSN1-208ENST00000399349 AQP5P55064 265 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 ANKS3Q6ZW76 656 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 SLC44A2Q8IWA5 706 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-208ENST00000399349 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 GID8Q9NWU2 228 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 NEXMIFQ5QGS0 1516 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 RAP1GDS1P52306 607 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 GALNTL6Q49A17 601 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 P3H2Q8IVL5 708 aa13.63□□□□□ -0.23
ITSN1-208ENST00000399349 NUDT12Q9BQG2 462 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms