RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 MEI4A8MW99 385 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 RNASEH1O60930 286 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 INHBAP08476 426 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 ALDH18A1P54886 795 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 AP2B1P63010 937 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 LRRC36Q1X8D7 754 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 KCNT1Q5JUK3 1230 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 SCARA3Q6AZY7 606 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 RAPH1Q70E73 1250 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 ANO5Q75V66 913 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 PRPF39Q86UA1 669 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 MYLK4Q86YV6 388 aaPredicted RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 PDIK1LQ8N165 341 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 AZIN2Q96A70 460 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 SPATA16Q9BXB7 569 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 UBE2OQ9C0C9 1292 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 IQCGQ9H095 443 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 EBF3Q9H4W6 596 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 DMAP1Q9NPF5 467 aaPredicted RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 CAPN14A8MX76 684 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 F8W8V4 182 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 CST8O60676 142 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 C4BPAP04003 597 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 EIF2AK2P19525 551 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 MMP8P22894 467 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 NLRP11P59045 1033 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 YWHAGP61981 247 aaKnown RBP eCLIP14.61□□□□□ -0.07
APOB-202ENST00000399256 UNC45BQ8IWX7 931 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 DRAXINQ8NBI3 349 aaPredicted RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 ACAP3Q96P50 834 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 OCEL1Q9H607 264 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 HOMER2Q9NSB8 354 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 CNTN3Q9P232 1028 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 PLA2G4CQ9UP65 541 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 TCRBV9S1A1TA0A576 114 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 KBTBD13C9JR72 458 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 SPECC1L-ADORA2AF8WAN1 911 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 COPEO14579 308 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 NDC80O14777 642 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 TM7SF2O76062 418 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 CCNE2O96020 404 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 PYGLP06737 847 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 MYCLP12524 364 aaPredicted RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 RANBP1P43487 201 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 CYP4A22Q5TCH4 519 aa14.61□□□□□ -0.07
APOB-202ENST00000399256 SRPK1Q96SB4 655 aaKnown RBP14.61□□□□□ -0.07
APOB-202ENST00000399256 E7ESA3 106 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 I3L4J1 428 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 DPEP1P16444 411 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 ACTR3P61158 418 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 TMPRSS15P98073 1019 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 ZNF200P98182 395 aaPredicted RBP14.6□□□□□ -0.07
APOB-202ENST00000399256 BST1Q10588 318 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 TRMT5Q32P41 509 aaKnown RBP14.6□□□□□ -0.07
APOB-202ENST00000399256 CES4AQ5XG92 561 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 FAM71DQ8N9W8 422 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 ZNF606Q8WXB4 792 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 NUB1Q9Y5A7 615 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 UBIAD1Q9Y5Z9 338 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 BRD2P25440 801 aaKnown RBP14.6□□□□□ -0.07
APOB-202ENST00000399256 HSD17B4P51659 736 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 SLC18A2Q05940 514 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 MTMR2Q13614 643 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 LIN52Q52LA3 116 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 ZNF394Q53GI3 561 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 LRRC38Q5VT99 294 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 SH2D5Q6ZV89 423 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 TAS1R3Q7RTX0 852 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 SESTD1Q86VW0 696 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 MTBPQ96DY7 904 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 CEP170P1Q96L14 293 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 NDNQ99608 321 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 TAGLN3Q9UI15 199 aa14.6□□□□□ -0.07
APOB-202ENST00000399256 GOLGB1Q14789 3259 aaKnown RBP14.6□□□□□ -0.07
APOB-202ENST00000399256 TRIM49D1C9J1S8 452 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CRABP2P29373 138 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 LIG4P49917 911 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CDK7P50613 346 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 AQP5P55064 265 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 UBAP2LQ14157 1087 aaKnown RBP14.59□□□□□ -0.07
APOB-202ENST00000399256 CTAGE3PQ8IX95 158 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 SLC44A1Q8WWI5 657 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CFAP36Q96G28 342 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 DDX56Q9NY93 547 aaKnown RBP14.59□□□□□ -0.07
APOB-202ENST00000399256 KCNK4Q9NYG8 393 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 C3orf70A6NLC5 250 aaPredicted RBP14.59□□□□□ -0.07
APOB-202ENST00000399256 PRR5-ARHGAP8B1AHC4 643 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 AVILO75366 819 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 GARTP22102 1010 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 PTPN7P35236 360 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 ARHGAP8P85298 464 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 FAM91A1Q658Y4 838 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CPXCR1Q8N123 301 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 TTLL6Q8N841 843 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 GSTCDQ8NEC7 633 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 RILPQ96NA2 401 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 CENPKQ9BS16 269 aa14.59□□□□□ -0.07
APOB-202ENST00000399256 GLIS2Q9BZE0 524 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms