RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NRCAMQ92823 1304 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 TMEM121Q9BTD3 319 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 IRAK4Q9NWZ3 460 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 PIN4Q9Y237 131 aaKnown RBP12.36□□□□□ -0.43
COL25A1-202ENST00000399127 FOXO6A8MYZ6 492 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 E7EVH7 732 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 RECQL4O94761 1208 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 KLRC2P26717 231 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 CNGA2Q16280 664 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 PTGISQ16647 500 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 GOLGA7BQ2TAP0 167 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 DEFB115Q30KQ5 88 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 DCAF4L1Q3SXM0 396 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-202ENST00000399127 PPP1R26Q5T8A7 1209 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-202ENST00000399127 SYDE1Q6ZW31 735 aaPredicted RBP12.36□□□□□ -0.43
COL25A1-202ENST00000399127 ARFGAP2Q8N6H7 521 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 CCDC89Q8N998 374 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 TLCD1Q96CP7 247 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 CAPNS2Q96L46 248 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 GABRQQ9UN88 632 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 NME7Q9Y5B8 376 aa12.36□□□□□ -0.43
COL25A1-202ENST00000399127 C3orf70A6NLC5 250 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-202ENST00000399127 HMGCRP04035 888 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 DARSP14868 501 aaKnown RBP12.35□□□□□ -0.43
COL25A1-202ENST00000399127 ARSEP51690 589 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 CCNHP51946 323 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-202ENST00000399127 YARSP54577 528 aaKnown RBP12.35□□□□□ -0.43
COL25A1-202ENST00000399127 INCA1Q0VD86 236 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 C15orf59Q2T9L4 293 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-202ENST00000399127 OR6B2Q6IFH4 312 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 NOTUMQ6P988 496 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 B4GALNT4Q76KP1 1039 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 SNX27Q96L92 541 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 AP5M1Q9H0R1 490 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 RASGRF2O14827 1237 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 CST8O60676 142 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 MIPP30301 263 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 GPS1Q13098 491 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 NOGQ13253 232 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
COL25A1-202ENST00000399127 TRNP1Q6NT89 227 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 FAM183BPQ6ZVS7 135 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 HHIPL1Q96JK4 782 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 CALN1Q9BXU9 219 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 EPN3Q9H201 632 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 GOLGA2P5Q9HBQ8 144 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 DDX56Q9NY93 547 aaKnown RBP12.35□□□□□ -0.43
COL25A1-202ENST00000399127 CTNNAL1Q9UBT7 734 aa12.35□□□□□ -0.43
COL25A1-202ENST00000399127 SGK1O00141 431 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 PFKMP08237 780 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 PDGFRBP09619 1106 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 ATP11AP98196 1134 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 PMF1Q6P1K2 205 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 TRMT10CQ7L0Y3 403 aaKnown RBP12.34□□□□□ -0.43
COL25A1-202ENST00000399127 C7orf31Q8N865 590 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 KCTD6Q8NC69 237 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 OR6B3Q8NGW1 331 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 ACTL9Q8TC94 416 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 ZNF483Q8TF39 744 aaPredicted RBP12.34□□□□□ -0.43
COL25A1-202ENST00000399127 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 DPEP3Q9H4B8 488 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 WDR35Q9P2L0 1181 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 SMIM35A0A1B0GVV1 85 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 ALDH1A1P00352 501 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 KRT7P08729 469 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 KDELR1P24390 212 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 FLT3LGP49771 235 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 PSEN2P49810 448 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 OTUD4Q01804 1114 aaKnown RBP12.34□□□□□ -0.43
COL25A1-202ENST00000399127 GRIK3Q13003 919 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 SNX17Q15036 470 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 HADHQ16836 314 aaKnown RBP12.34□□□□□ -0.43
COL25A1-202ENST00000399127 LCLAT1Q6UWP7 414 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 POLNQ7Z5Q5 900 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 TTC30AQ86WT1 665 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 SCUBE3Q8IX30 993 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 PGM2Q96G03 612 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 PEBP4Q96S96 227 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 B3GNT5Q9BYG0 378 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 ADAM7Q9H2U9 754 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 NINJ2Q9NZG7 142 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 USP18Q9UMW8 372 aa12.34□□□□□ -0.43
COL25A1-202ENST00000399127 MBLAC1A4D2B0 266 aaPredicted RBP12.33□□□□□ -0.44
COL25A1-202ENST00000399127 A6NNZ2 444 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 GOLGA8MH3BSY2 632 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 RNF8O76064 485 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 TTC4O95801 387 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 PDGFRAP16234 1089 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 GABRB2P47870 512 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 VCPP55072 806 aaKnown RBP12.33□□□□□ -0.44
COL25A1-202ENST00000399127 GDF10P55107 478 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 COPS2P61201 443 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 MMRN1Q13201 1228 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms