RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 FAM71DQ8N9W8 422 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 SLC44A5Q8NCS7 719 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 PMPCBO75439 489 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 ASS1P00966 412 aaKnown RBP12.04□□□□□ -0.48
HLCS-202ENST00000399120 NOS3P29474 1203 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 TRAF2Q12933 501 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 FAM117BQ6P1L5 589 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 DENND6AQ8IWF6 608 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 FRMD8Q9BZ67 464 aaPredicted RBP12.04□□□□□ -0.48
HLCS-202ENST00000399120 SLITRK2Q9H156 845 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 PCDHB7Q9Y5E2 793 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 GNG14A0A1W2PPG7 69 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 TRIM49D1C9J1S8 452 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 FAM20BO75063 409 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 CYP7B1O75881 506 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 PRDX5P30044 214 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
HLCS-202ENST00000399120 OTUD4Q01804 1114 aaKnown RBP12.04□□□□□ -0.48
HLCS-202ENST00000399120 SNRNP35Q16560 246 aaKnown RBP12.04□□□□□ -0.48
HLCS-202ENST00000399120 DGKDQ16760 1214 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 ATP6AP1LQ52LC2 224 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 BNC2Q6ZN30 1099 aaPredicted RBP12.04□□□□□ -0.48
HLCS-202ENST00000399120 PHACTR4Q8IZ21 702 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 UBA3Q8TBC4 463 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 VPS33AQ96AX1 596 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 VAV3Q9UKW4 847 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 POLR1DQ9Y2S0 133 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
HLCS-202ENST00000399120 P4HA2O15460 535 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 SLC11A2P49281 568 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 IRAK1BP1Q5VVH5 260 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 C3orf20Q8ND61 904 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 KLHL28Q9NXS3 571 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 TRPC4Q9UBN4 977 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 LNPEPQ9UIQ6 1025 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 KDM5AP29375 1690 aaKnown RBP12.03□□□□□ -0.48
HLCS-202ENST00000399120 HEG1Q9ULI3 1381 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 ASNA1O43681 348 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 SERPINB8P50452 374 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
HLCS-202ENST00000399120 IZUMO1Q8IYV9 350 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 CACTIN-AS1Q8N1I8 211 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 KLHL1Q9NR64 748 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 KRT6BP04259 564 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 KRT6CP48668 564 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 NME5P56597 212 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 ATP2C1P98194 919 aaPredicted RBP12.03□□□□□ -0.48
HLCS-202ENST00000399120 DDR2Q16832 855 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 LRRC49Q8IUZ0 686 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 WDR24Q96S15 920 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 SH3GLB1Q9Y371 365 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 MAPKBP1O60336 1514 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 DYTNA2CJ06 578 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 H3BMM5 538 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 IL6P05231 212 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 RBP3P10745 1247 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 IL5RAQ01344 420 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 OASLQ15646 514 aaKnown RBP12.03□□□□□ -0.48
HLCS-202ENST00000399120 ZSWIM7Q19AV6 140 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 CCNI2Q6ZMN8 369 aaPredicted RBP12.03□□□□□ -0.48
HLCS-202ENST00000399120 UCMAQ8WVF2 138 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
HLCS-202ENST00000399120 SERPINB12Q96P63 405 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 CD209Q9NNX6 404 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 DAPK2Q9UIK4 370 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 SSU72P8A0A1W2PR75 194 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 PRAMEF22A3QJZ6 481 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 NR5A2O00482 541 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 MAGEB2O15479 319 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 RAD51CO43502 376 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 GH1P01241 217 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 FAM200BP0CF97 657 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 COMTP21964 271 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 PSMB9P28065 219 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 PPP2R1BP30154 601 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 MTF1Q14872 753 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 BARGINQ6ZT62 677 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 MTSS1LQ765P7 747 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 CCDC3Q9BQI4 270 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 POLG2Q9UHN1 485 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 DUSP12Q9UNI6 340 aa12.03□□□□□ -0.48
HLCS-202ENST00000399120 TBC1D12O60347 775 aa12.02□□□□□ -0.48
HLCS-202ENST00000399120 FCGR1AP12314 374 aa12.02□□□□□ -0.48
HLCS-202ENST00000399120 DSG3P32926 999 aa12.02□□□□□ -0.48
HLCS-202ENST00000399120 RAD23AP54725 363 aa12.02□□□□□ -0.48
HLCS-202ENST00000399120 MKRN4PQ13434 485 aaPredicted RBP12.02□□□□□ -0.48
HLCS-202ENST00000399120 NAB2Q15742 525 aa12.02□□□□□ -0.48
HLCS-202ENST00000399120 MEI4A8MW99 385 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 MTM1Q13496 603 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 AKIRIN2Q53H80 203 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 FAM182BQ5T319 152 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 SPIRE2Q8WWL2 714 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 FAM111AQ96PZ2 611 aa12.02□□□□□ -0.49
HLCS-202ENST00000399120 PSMD12O00232 456 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 DYNC1LI2O43237 492 aaPredicted RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 RNASEH1O60930 286 aaKnown RBP12.02□□□□□ -0.49
HLCS-202ENST00000399120 SLC2A3P11169 496 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms