RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PPIL6Q8IXY8 311 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CRYBG2Q8N1P7 616 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ACTL9Q8TC94 416 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PTPN18Q99952 460 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MAK16Q9BXY0 300 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 FRMD8Q9BZ67 464 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PRDM16Q9HAZ2 1276 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KLHL11Q9NVR0 708 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 GDAP2Q9NXN4 497 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 HMGXB4Q9UGU5 601 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PRPSAP2O60256 369 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KPNA6O60684 536 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PDGFRAP16234 1089 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 IL1R2P27930 398 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 VPS41P49754 854 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SLC18A1P54219 525 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 DPH6Q7L8W6 267 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SLC35F5Q8WV83 523 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ATXN2LQ8WWM7 1075 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RSAD2Q8WXG1 361 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ZNF317Q96PQ6 595 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SELENOSQ9BQE4 189 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TRIM6Q9C030 488 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 NSRP1Q9H0G5 558 aaKnown RBP18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RASSF4Q9H2L5 321 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ZWILCHQ9H900 591 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SNTG2Q9NY99 539 aa18.57■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CFAP69A5D8W1 941 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MCF2LO15068 1137 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ACADSBP45954 432 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 OTUD4Q01804 1114 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SLC6A3Q01959 620 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MFSD10Q14728 455 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 LONRF1Q17RB8 773 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 OR6B2Q6IFH4 312 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 C6orf89Q6UWU4 347 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TADA2BQ86TJ2 420 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TAX1BP1Q86VP1 789 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CACNA2D3Q8IZS8 1091 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 OTUD6BQ8N6M0 293 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KAT2BQ92831 832 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PPP1R16BQ96T49 567 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 FARP1Q9Y4F1 1045 aaPredicted RBP18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SNX9Q9Y5X1 595 aa18.56■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PIRO00625 290 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RPLP2P05387 115 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RPL34P49207 117 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 GOLGA7BQ2TAP0 167 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 C9orf57Q5W0N0 161 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 EMC1Q8N766 993 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ANKS4BQ8N8V4 417 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 UBA3Q8TBC4 463 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RXFP2Q8WXD0 754 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 AP5M1Q9H0R1 490 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 LRRC4CQ9HCJ2 640 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SLC24A2Q9UI40 661 aa18.55■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SMIM23A6NLE4 172 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CELF2O95319 508 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PFKMP08237 780 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ZNF865P0CJ78 1059 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 DRD4P21917 467 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PHBP35232 272 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SLCO1A2P46721 670 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PSEN2P49810 448 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CRYBB1P53674 252 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ARL4CP56559 192 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MKRN3Q13064 507 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KCTD19Q17RG1 926 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ZC3H12AQ5D1E8 599 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 FBXO47Q5MNV8 452 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PPP1R21Q6ZMI0 780 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TLK2Q86UE8 772 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RFX6Q8HWS3 928 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 UHMK1Q8TAS1 419 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PRCCQ92733 491 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TMEM121Q9BTD3 319 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 FAM49AQ9H0Q0 323 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SAYSD1Q9NPB0 183 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TJP2Q9UDY2 1190 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 E5RJQ4 531 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MDM4O15151 490 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PECAM1P16284 738 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TGM2P21980 687 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SDC4P31431 198 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PTPN9P43378 593 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 INHBEP58166 350 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 HIF1AQ16665 826 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ARHGEF18Q6ZSZ5 1173 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 FAM183BPQ6ZVS7 135 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 LIMS2Q7Z4I7 341 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ANKRD52Q8NB46 1076 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MDM1Q8TC05 714 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SEC16BQ96JE7 1060 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CABS1Q96KC9 395 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 HSFY1Q96LI6 401 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ZMAT2Q96NC0 199 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 EURLQ9NYK6 297 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 DDX20Q9UHI6 824 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms