RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FAM47AQ5JRC9 791 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 DEPDC1Q5TB30 811 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 RETSATQ6NUM9 610 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 EMBQ6PCB8 327 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 HEATR3Q7Z4Q2 680 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 RHOT2Q8IXI1 618 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 LRRC34Q8IZ02 419 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ZBTB44Q8NCP5 570 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 NSUN6Q8TEA1 469 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GJA10Q969M2 543 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF287Q9HBT7 754 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 DMAP1Q9NPF5 467 aaPredicted RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GGA3Q9NZ52 723 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 HSPBP1Q9NZL4 362 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SRP68Q9UHB9 627 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 MOSPD1Q9UJG1 213 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CHMP2BQ9UQN3 213 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SSUH2Q9Y2M2 353 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 A6NHS1 94 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 WNT7AO00755 349 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SORBS3O60504 671 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 FSBPO95073 299 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 LINGO3P0C6S8 592 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SCNN1GP51170 649 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 EPHB4P54760 987 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ASPHQ12797 758 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 RALGDSQ12967 914 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CDONQ4KMG0 1287 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 TTI2Q6NXR4 508 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CLEC2AQ6UVW9 174 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CCDC149Q6ZUS6 474 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF365Q70YC5 407 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CACNA2D4Q7Z3S7 1137 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 KRT25Q7Z3Z0 450 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 MMGT1Q8N4V1 131 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 MYCBPAPQ8TBZ2 947 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ADAM32Q8TC27 787 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ENKURQ8TC29 256 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 BCAS4Q8TDM0 211 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 TMEM237Q96Q45 408 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ERGIC2Q96RQ1 377 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 TCF25Q9BQ70 676 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CHCHD6Q9BRQ6 235 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 RAB34Q9BZG1 259 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 KLC4Q9NSK0 619 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 USP40Q9NVE5 1235 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 THAP1Q9NVV9 213 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 KBTBD4Q9NVX7 518 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ARHGEF38Q9NXL2 777 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ZNF219Q9P2Y4 722 aaPredicted RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ARAP2Q8WZ64 1704 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 LTBP3Q9NS15 1303 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SCN9AQ15858 1988 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 C15orf38-AP3S2A0A0A6YYH1 394 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ANKRD65E5RJM6 399 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GREM1O60565 184 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CTNND1O60716 968 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SYF2O95926 243 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ITGB3P05106 788 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ABCB1P08183 1280 aaPredicted RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CLTAP09496 248 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GNA11P29992 359 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 HSPA13P48723 471 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GSK3AP49840 483 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 PMS1P54277 932 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GPR85P60893 370 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 NFKB2Q00653 900 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 RFTN1Q14699 578 aaPredicted RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 TCTE1Q5JU00 501 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GRTP1Q5TC63 336 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 TCERG1LQ5VWI1 586 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ALS2CLQ60I27 953 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 PDPK2PQ6A1A2 396 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ELMSAN1Q6PJG2 1045 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 WDR59Q6PJI9 974 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ADGRA1Q86SQ6 560 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SESTD1Q86VW0 696 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 IRF2BP1Q8IU81 584 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 RNF135Q8IUD6 432 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 CCDC63Q8NA47 563 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 PNMA1Q8ND90 353 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SEPT1Q8WYJ6 367 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 HDAC2Q92769 488 aaKnown RBP6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SHISA4Q96DD7 197 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 EGLN2Q96KS0 407 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 GDAP1L1Q96MZ0 367 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 ASB2Q96Q27 587 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 PLIN2Q99541 437 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SIKE1Q9BRV8 207 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SNX25Q9H3E2 840 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SYNDIG1Q9H7V2 258 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 HACD3Q9P035 362 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SENP1Q9P0U3 644 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 RNF14Q9UBS8 474 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 PHTF1Q9UMS5 762 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SNX12Q9UMY4 172 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 SOX13Q9UN79 622 aa6.88□□□□□ -1.31
TM9SF4-202ENST00000398022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms