RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 PCDHA10Q9Y5I2 948 aa16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 BRCA1P38398 1863 aaKnown RBP16.72■□□□□ 0.27
CHMP1A-201ENST00000397901 GOLGA8RI6L899 631 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 EGFRP00533 1210 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 VAV1P15498 845 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 ADRA1DP25100 572 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 NEK3P51956 506 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 ZNF280AP59817 542 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 ZNF252P-AS1Q0IIN9 211 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 PSMD6Q15008 389 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 MAPK6Q16659 721 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 CTC1Q2NKJ3 1217 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 ZBTB41Q5SVQ8 909 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 SWSAP1Q6NVH7 229 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 CLNKQ7Z7G1 428 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 MTDHQ86UE4 582 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 ZBTB45Q96K62 511 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 KLF6Q99612 283 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 IQCGQ9H095 443 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 PXMP2Q9NR77 195 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 SENP1Q9P0U3 644 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 SAE1Q9UBE0 346 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 NUMBLQ9Y6R0 609 aa16.71■□□□□ 0.27
CHMP1A-201ENST00000397901 A8MXQ7 604 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 ALOX15BO15296 676 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 SSTR1P30872 391 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 GPX6P59796 221 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 DYNLT1P63172 113 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 DSG1Q02413 1049 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 TFDP1Q14186 410 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 ZNF398Q8TD17 642 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 MCUR1Q96AQ8 359 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 SLX1AQ9BQ83 275 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 PHACTR1Q9C0D0 580 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 ALG13Q9NP73 1137 aaKnown RBP16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 AGO2Q9UKV8 859 aaKnown RBP16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 NUB1Q9Y5A7 615 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 ZNF541Q9H0D2 1346 aa16.71■□□□□ 0.26
CHMP1A-201ENST00000397901 GYG2O15488 501 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 ATP9BO43861 1147 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 VCPP55072 806 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 OGDHQ02218 1023 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 TMEM259Q4ZIN3 620 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 PLEKHG4Q58EX7 1191 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.268e-7■■□□□ 12.1
CHMP1A-201ENST00000397901 JDP2Q8WYK2 163 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 VCPIP1Q96JH7 1222 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 PICK1Q9NRD5 415 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 CHMP2BQ9UQN3 213 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 ATP2A1O14983 1001 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 WDR46O15213 610 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 GLRA2P23416 452 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 SLC18A1P54219 525 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 SEPT7Q16181 437 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 SEZ6Q53EL9 994 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 DCUN1D2Q6PH85 259 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 ECSITQ9BQ95 431 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 HAPLN2Q9GZV7 340 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 C17orf75Q9HAS0 396 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 CYLDQ9NQC7 956 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 RBAKQ9NYW8 714 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 NDUFA13Q9P0J0 144 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 ANKFY1Q9P2R3 1169 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 CLUHO75153 1309 aa16.7■□□□□ 0.26
CHMP1A-201ENST00000397901 hCG_1818297A0A087WSY0 165 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 TMEM191CA6NGB0 347 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 NFKBIEO00221 500 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 HARSP12081 509 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 GEMIN4P57678 1058 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 HPCAP84074 193 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 GHRHRQ02643 423 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 SULT2A1Q06520 285 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 R3HDM1Q15032 1099 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 OASLQ15646 514 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 HIF1AQ16665 826 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 CCDC142Q17RM4 750 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 MTERF2Q49AM1 385 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 FYB2Q5VWT5 728 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 ANKRD22Q5VYY1 191 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 KLC3Q6P597 504 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 IZUMO2Q6UXV1 221 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 RFWD2Q8NHY2 731 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 IRGQQ8WZA9 623 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 LPAR1Q92633 364 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 PPP2R3CQ969Q6 453 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 CATSPER2Q96P56 530 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 SLC38A10Q9HBR0 1119 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 ARHGAP28Q9P2N2 729 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 SLC24A2Q9UI40 661 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 CTDP1Q9Y5B0 961 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 SMIM31A0A1B0GVY4 71 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 STBD1O95210 358 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 OATP04181 439 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 CLDN10P78369 228 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 TMEM62Q0P6H9 643 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 MSS51Q4VC12 460 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms