RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 RARRES1P49788 294 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 NUDT2P50583 147 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 DLG4P78352 724 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 IRX1P78414 480 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 MXD4Q14582 209 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 CRYMQ14894 314 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 CCNG2Q16589 344 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 ANO4Q32M45 955 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 DAB2IPQ5VWQ8 1189 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 MFSD7Q6UXD7 560 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 TEX9Q8N6V9 391 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 SLC16A10Q8TF71 515 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 TRIM15Q9C019 465 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 GGA3Q9NZ52 723 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 SAE1Q9UBE0 346 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 GTPBP10A4D1E9 387 aaKnown RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 ZNF263O14978 683 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 FDX1P10109 184 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SPRP35270 261 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 GLRBP48167 497 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SERPINB9P50453 376 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 RASA2Q15283 850 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 PDCD2Q16342 344 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 DACT2Q5SW24 774 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 EFCAB12Q6NXP0 572 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 IPMKQ8NFU5 416 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 AFG1LQ8WV93 481 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 RMDN1Q96DB5 314 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 HIC2Q96JB3 615 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 TNIP3Q96KP6 325 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 MMP19Q99542 508 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 EGFL8Q99944 293 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 RXFP1Q9HBX9 757 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 NINJ2Q9NZG7 142 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 AFF4Q9UHB7 1163 aaKnown RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SNX5Q9Y5X3 404 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 MT-CO1P00395 513 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 RAP1GAPP47736 663 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 INPP1P49441 399 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 HSD17B4P51659 736 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 COPAP53621 1224 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 OCA2Q04671 838 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 PPP3CAQ08209 521 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 MOXD1Q6UVY6 613 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SPOCD1Q6ZMY3 1216 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 TCP10LQ8TDR4 215 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SNRNP27Q8WVK2 155 aaKnown RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 DNAJC19Q96DA6 116 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 EPAS1Q99814 870 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 MRPL1Q9BYD6 325 aaKnown RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 CEP41Q9BYV8 373 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 UNKQ9C0B0 810 aaKnown RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 ADNPQ9H2P0 1102 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 DCLRE1BQ9H816 532 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 CAAP1Q9H8G2 361 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 PLEKHA5Q9HAU0 1116 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SP110Q9HB58 689 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 FZD1Q9UP38 647 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 NHSQ6T4R5 1651 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 LAMB1P07942 1786 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 KLRG2A4D1S0 409 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 PSTPIP1O43586 416 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 EDIL3O43854 480 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 CLCN3P51790 818 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 RPL10AP62906 217 aaKnown RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 ITGB3BPQ13352 177 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 MCOLN2Q8IZK6 566 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 ZKSCAN4Q969J2 545 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 TMEM120AQ9BXJ8 343 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC40-204ENST00000397545 E5RI56 91 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 POLBP06746 335 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 IL10P22301 178 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SERPINB5P36952 375 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 DAB2P98082 770 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 GOLGA7BQ2TAP0 167 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 BTBD8Q5XKL5 378 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 IYDQ6PHW0 289 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 OTOP1Q7RTM1 612 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 ACOT1Q86TX2 421 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 POU5F2Q8N7G0 328 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 SLC7A14Q8TBB6 771 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 RNF217Q8TC41 542 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 PARD3BQ8TEW8 1205 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 FAM136AQ96C01 138 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 CISHQ9NSE2 258 aa11.18□□□□□ -0.62
CCDC40-204ENST00000397545 COL24A1Q17RW2 1714 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 ANGPT2O15123 496 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 SPAG6O75602 509 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 NPTXRO95502 500 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 HMBSP08397 361 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 FLT3P36888 993 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 KCNJ2P63252 427 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 CYP24A1Q07973 514 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 FLOT2Q14254 428 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 IMPG1Q17R60 797 aa11.17□□□□□ -0.62
CCDC40-204ENST00000397545 DENND5BQ6ZUT9 1274 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms