RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CHD7Q9P2D1 2997 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 A0A0A6YYK5 440 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-204ENST00000397443 XPO1O14980 1071 aaKnown RBP22.34■■□□□ 1.17
CPNE1-204ENST00000397443 GABBR2O75899 941 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 BMPR1AP36894 532 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 DSG1Q02413 1049 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 MAMLD1Q13495 774 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 RNF19BQ6ZMZ0 732 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 XYLT1Q86Y38 959 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 RNF10Q8N5U6 811 aaKnown RBP22.34■■□□□ 1.17
CPNE1-204ENST00000397443 TTC9BQ8N6N2 239 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 ZMIZ2Q8NF64 920 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 SLC4A5Q9BY07 1137 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 MTRRQ9UBK8 725 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 NLRC5Q86WI3 1866 aa22.34■■□□□ 1.17
CPNE1-204ENST00000397443 PDE4DIPQ5VU43 2346 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 CARNS1A5YM72 827 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 TNRC18O15417 2968 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-204ENST00000397443 TBC1D4O60343 1298 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 GRIK1P39086 918 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 PBX2P40425 430 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 PLA2G4AP47712 749 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 FAM183BPQ6ZVS7 135 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 TPCN2Q8NHX9 752 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 PIWIL1Q96J94 861 aaKnown RBP22.33■■□□□ 1.17
CPNE1-204ENST00000397443 ALS2CR12Q96Q35 445 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 GDF15Q99988 308 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 AVENQ9NQS1 362 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-204ENST00000397443 PARVAQ9NVD7 372 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 ANAPC7Q9UJX3 599 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 STRIP2Q9ULQ0 834 aa22.33■■□□□ 1.17
CPNE1-204ENST00000397443 F8VP50 259 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 FANCGO15287 622 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 RNASE9P60153 205 aaKnown RBP22.33■■□□□ 1.16
CPNE1-204ENST00000397443 ADIGQ0VDE8 80 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 NFE2Q16621 373 aaPredicted RBP22.33■■□□□ 1.16
CPNE1-204ENST00000397443 FAM102AQ5T9C2 384 aaPredicted RBP22.33■■□□□ 1.16
CPNE1-204ENST00000397443 GPRIN1Q7Z2K8 1008 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 STKLD1Q8NE28 680 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 CLEC4CQ8WTT0 213 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 MCEEQ96PE7 176 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 SELENOOQ9BVL4 669 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 SLC27A5Q9Y2P5 690 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 HYOU1Q9Y4L1 999 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 PCDHB5Q9Y5E4 795 aa22.33■■□□□ 1.16
CPNE1-204ENST00000397443 CHD9Q3L8U1 2897 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 PLXNA4Q9HCM2 1894 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 GRID2IPA4D2P6 1211 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 ENC1O14682 589 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 GRAP2O75791 330 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 SOAT2O75908 522 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 FTCDO95954 541 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 GABRB2P47870 512 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 RPL7AP62424 266 aaKnown RBP22.32■■□□□ 1.16
CPNE1-204ENST00000397443 ROR1Q01973 937 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 SDHAF4Q5VUM1 108 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 PLEKHA7Q6IQ23 1121 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 DCUN1D2Q6PH85 259 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 DAAM2Q86T65 1068 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 TRIM58Q8NG06 486 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 NDRG1Q92597 394 aaKnown RBP22.32■■□□□ 1.16
CPNE1-204ENST00000397443 CLSTN3Q9BQT9 956 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 LRRC4Q9HBW1 653 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 DMAP1Q9NPF5 467 aaPredicted RBP22.32■■□□□ 1.16
CPNE1-204ENST00000397443 METTL5Q9NRN9 209 aaKnown RBP22.32■■□□□ 1.16
CPNE1-204ENST00000397443 MRPL17Q9NRX2 175 aaKnown RBP22.32■■□□□ 1.16
CPNE1-204ENST00000397443 UVRAGQ9P2Y5 699 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 SCINQ9Y6U3 715 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 PTPRDP23468 1912 aa22.32■■□□□ 1.16
CPNE1-204ENST00000397443 MTMR11A4FU01 709 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 BUB1BO60566 1050 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-204ENST00000397443 GPR15P49685 360 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 NDUFV1P49821 464 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 IFRD2Q12894 506 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-204ENST00000397443 GPR17Q13304 367 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 MESDQ14696 234 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 IFI16Q16666 785 aaKnown RBP22.31■■□□□ 1.16
CPNE1-204ENST00000397443 TMEM110Q86TL2 294 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 C3orf20Q8ND61 904 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 STK32AQ8WU08 396 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 CERS4Q9HA82 394 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 MRPL47Q9HD33 250 aaKnown RBP22.31■■□□□ 1.16
CPNE1-204ENST00000397443 YBX2Q9Y2T7 364 aaKnown RBP22.31■■□□□ 1.16
CPNE1-204ENST00000397443 MYO7AQ13402 2215 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 CDH23Q9H251 3354 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 WDR27A2RRH5 827 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 PAPSS1O43252 624 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-204ENST00000397443 CASQ1P31415 396 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 DNA2P51530 1060 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 ADCY1Q08828 1119 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 TAF5Q15542 800 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 DDR2Q16832 855 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 TMC7Q7Z402 723 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 HSFY1Q96LI6 401 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 SEPT5Q99719 369 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-204ENST00000397443 BACE2Q9Y5Z0 518 aa22.31■■□□□ 1.16
CPNE1-204ENST00000397443 KRT3P12035 628 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 TKTL1P51854 596 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 DUSP4Q13115 394 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 ZNF268Q14587 947 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms