RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 VPS52Q8N1B4 723 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 SLC4A11Q8NBS3 891 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 TNIP3Q96KP6 325 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 C11orf84Q9BUA3 381 aaPredicted RBP15.75■□□□□ 0.11
CAPN3-207ENST00000397200 SLC28A3Q9HAS3 691 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 ACP6Q9NPH0 428 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 NME7Q9Y5B8 376 aa15.75■□□□□ 0.11
CAPN3-207ENST00000397200 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 MIF4GDA9UHW6 222 aaKnown RBP15.74■□□□□ 0.11
CAPN3-207ENST00000397200 H7C4K7 107 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 HCRTO43612 131 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 CEP104O60308 925 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 URODP06132 367 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 UNGP13051 313 aaPredicted RBP15.74■□□□□ 0.11
CAPN3-207ENST00000397200 ACAT1P24752 427 aaKnown RBP15.74■□□□□ 0.11
CAPN3-207ENST00000397200 DNAJB2P25686 324 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 GLUD2P49448 558 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 CTXN3Q4LDR2 81 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 DCAF12L1Q5VU92 463 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 TAF3Q5VWG9 929 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 ACAD10Q6JQN1 1059 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 ANKS3Q6ZW76 656 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 SPRED2Q7Z698 418 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 ACOT1Q86TX2 421 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 RIN2Q8WYP3 895 aaPredicted RBP15.74■□□□□ 0.11
CAPN3-207ENST00000397200 SYT15Q9BQS2 421 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 ACBD6Q9BR61 282 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 DPEP3Q9H4B8 488 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 ST7Q9NRC1 585 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 CHST7Q9NS84 486 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 UVRAGQ9P2Y5 699 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 CDH9Q9ULB4 789 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 LZTS1Q9Y250 596 aa15.74■□□□□ 0.11
CAPN3-207ENST00000397200 LAMA2P24043 3122 aaKnown RBP15.74■□□□□ 0.11
CAPN3-207ENST00000397200 RANBP2P49792 3224 aaKnown RBP15.73■□□□□ 0.11
CAPN3-207ENST00000397200 ZMYND10O75800 440 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 CD19P15391 556 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 OAS2P29728 719 aaKnown RBP15.73■□□□□ 0.11
CAPN3-207ENST00000397200 GNA15P30679 374 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 TSPY1Q01534 308 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 DSG1Q02413 1049 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 NNTQ13423 1086 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 MRPL58Q14197 206 aaKnown RBP15.73■□□□□ 0.11
CAPN3-207ENST00000397200 CRYBG2Q8N1P7 616 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 EIF1ADQ8N9N8 165 aaKnown RBP15.73■□□□□ 0.11
CAPN3-207ENST00000397200 FBXO22Q8NEZ5 403 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 PIK3R5Q8WYR1 880 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 CAVIN3Q969G5 261 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 HEXIM2Q96MH2 286 aaKnown RBP15.73■□□□□ 0.11
CAPN3-207ENST00000397200 RTP3Q9BQQ7 232 aa15.73■□□□□ 0.11
CAPN3-207ENST00000397200 ALG13Q9NP73 1137 aaKnown RBP15.73■□□□□ 0.11
CAPN3-207ENST00000397200 AVENQ9NQS1 362 aaPredicted RBP15.73■□□□□ 0.11
CAPN3-207ENST00000397200 H3BQF6 201 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 C2CD2LO14523 706 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 PSMC1P62191 440 aaKnown RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 UBE3AQ05086 875 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 CLUL1Q15846 466 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 PSMD5Q16401 504 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 EMBQ6PCB8 327 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 PRSS55Q6UWB4 352 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 GSPT2Q8IYD1 628 aaKnown RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 B3GALNT2Q8NCR0 500 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 OR10T2Q8NGX3 314 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 CD101Q93033 1021 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 TIFAQ96CG3 184 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 KRT12Q99456 494 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 OXCT2Q9BYC2 517 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 ZBP1Q9H171 429 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 ACBD3Q9H3P7 528 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 CTTNBP2NLQ9P2B4 639 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 KIAA1257Q9ULG3 409 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 HPCAL4Q9UM19 191 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 ALG6Q9Y672 507 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 OR6C75A6NL08 312 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 THAP12O43422 761 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 ATP2C2O75185 946 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 HEXIM1O94992 359 aaKnown RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 CALCAP01258 141 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 CYP1A1P04798 512 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 GLI1P08151 1106 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 VDRP11473 427 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 PTPN1P18031 435 aaKnown RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 SLC7A5Q01650 507 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 CENPCQ03188 943 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 GPS2Q13227 327 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 GLIPR1L2Q4G1C9 344 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 SGO2Q562F6 1265 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 INTS6LQ5JSJ4 861 aaKnown RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 KIAA0319Q5VV43 1072 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 TRIM72Q6ZMU5 477 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 IFT20Q8IY31 132 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 SPPL3Q8TCT6 385 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 POF1BQ8WVV4 589 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 SLITRK6Q9H5Y7 841 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 CERS4Q9HA82 394 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 MRPL17Q9NRX2 175 aaKnown RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 MTRRQ9UBK8 725 aa15.72■□□□□ 0.11
CAPN3-207ENST00000397200 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
CAPN3-207ENST00000397200 H3BNC9 293 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms