RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 SLC16A10Q8TF71 515 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 BBS2Q9BXC9 721 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 SMARCAL1Q9NZC9 954 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 CLIP3Q96DZ5 547 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 ACTR5Q9H9F9 607 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-208ENST00000397030 TBX20Q9UMR3 447 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 RASA1P20936 1047 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 SPRP35270 261 aaPredicted RBP18.08■□□□□ 0.48
MCF2L-208ENST00000397030 PPP2R2AP63151 447 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 MROH9Q5TGP6 573 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 EMBQ6PCB8 327 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 TFAP2DQ7Z6R9 452 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 CLPBQ9H078 707 aa18.08■□□□□ 0.48
MCF2L-208ENST00000397030 TBC1D3BA6NDS4 549 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 HIC1Q14526 733 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 MFSD10Q14728 455 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 CYP4X1Q8N118 509 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 GAS2L1Q99501 681 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 KIF2CQ99661 725 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 MYMKA6NI61 221 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 CST8O60676 142 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 TGFB2P61812 414 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 RARS2Q5T160 578 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 UBXN6Q9BZV1 441 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 EVA1BQ9NVM1 165 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 NSMCE4AQ9NXX6 385 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 EIF3LQ9Y262 564 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 PNPLA7Q6ZV29 1317 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 GEMP55040 296 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 CCL23P55773 120 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 ZMAT2Q96NC0 199 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 GOLPH3Q9H4A6 298 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 KRT84Q9NSB2 600 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 DDX28Q9NUL7 540 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 NMRK1Q9NWW6 199 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 DSEQ9UL01 958 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 A0A087WZ62 844 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 SCAMP3O14828 347 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 ANXA9O76027 345 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 FNTAP49354 379 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 ANO5Q75V66 913 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 FDXACB1Q9BRP7 624 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 FICDQ9BVA6 458 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 FAM187AA6NFU0 413 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 ZNF185O15231 689 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 CDH2P19022 906 aaPredicted RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 GAS2L3Q86XJ1 694 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 SIRT2Q8IXJ6 389 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 EDEM1Q92611 657 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 GPRASP2Q96D09 838 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 DEPDC7Q96QD5 511 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 THUMPD3Q9BV44 507 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 DDX43Q9NXZ2 648 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 STIP1P31948 543 aaKnown RBP18.07■□□□□ 0.48
MCF2L-208ENST00000397030 ICE2Q659A1 982 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 POLR1DQ9Y2S0 133 aa18.07■□□□□ 0.48
MCF2L-208ENST00000397030 CAPN1P07384 714 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 CLCN6P51797 869 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 SEMA3FQ13275 785 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 GRIK4Q16099 956 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 CYP51A1Q16850 503 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 PREPLQ4J6C6 727 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-208ENST00000397030 ARHGAP17Q68EM7 881 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 CCDC81Q6ZN84 652 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 SPATA31A5Q5VU36 1347 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 SPATA31A7Q8IWB4 1347 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 GRID2IPA4D2P6 1211 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 BYSLQ13895 437 aaKnown RBP18.06■□□□□ 0.48
MCF2L-208ENST00000397030 PDIA5Q14554 519 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 C2CD6Q53TS8 623 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 UNKQ9C0B0 810 aaKnown RBP18.06■□□□□ 0.48
MCF2L-208ENST00000397030 TAF1DQ9H5J8 278 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-208ENST00000397030 AASDHPPTQ9NRN7 309 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 RUVBL2Q9Y230 463 aaKnown RBP18.06■□□□□ 0.48
MCF2L-208ENST00000397030 CSF1RP07333 972 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 C21orf59P57076 290 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 TGM3Q08188 693 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 ALX1Q15699 326 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 CACHD1Q5VU97 1274 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 TLK2Q86UE8 772 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 RBM15Q96T37 977 aaKnown RBP eCLIP18.06■□□□□ 0.488e-6■■■■■ 30.1
MCF2L-208ENST00000397030 RASSF10A6NK89 507 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 ANKRD65E5RJM6 399 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 ITGALP20701 1170 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 TTC39BQ5VTQ0 682 aaPredicted RBP18.06■□□□□ 0.48
MCF2L-208ENST00000397030 TMEM199Q8N511 208 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 APOL2Q9BQE5 337 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 NEUROD4Q9HD90 331 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 PAK5Q9P286 719 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 MGAT4DA6NG13 374 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 MTA2O94776 668 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 IKBKEQ14164 716 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 ECSITQ9BQ95 431 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 ATP6V1HQ9UI12 483 aa18.06■□□□□ 0.48
MCF2L-208ENST00000397030 NRKQ7Z2Y5 1582 aa18.05■□□□□ 0.48
MCF2L-208ENST00000397030 ACAT1P24752 427 aaKnown RBP18.05■□□□□ 0.48
MCF2L-208ENST00000397030 FEN1P39748 380 aaKnown RBP18.05■□□□□ 0.48
MCF2L-208ENST00000397030 CCR4P51679 360 aa18.05■□□□□ 0.48
MCF2L-208ENST00000397030 CAPRIN2Q6IMN6 1127 aaKnown RBP18.05■□□□□ 0.48
MCF2L-208ENST00000397030 MPZL3Q6UWV2 235 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms