RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 GRK4P32298 578 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 HK2P52789 917 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 EXOSC10Q01780 885 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 FAM160B2Q86V87 743 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 CROCCP3Q8IVE0 287 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 POMGNT2Q8NAT1 580 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ZNF671Q8TAW3 534 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 MED15Q96RN5 788 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 S100A13Q99584 98 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 AGPAT1Q99943 283 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 BDH2Q9BUT1 245 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 PIF1Q9H611 641 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 FKBP14Q9NWM8 211 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 PI4KBQ9UBF8 816 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 TRMT6Q9UJA5 497 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 VWA5AO00534 786 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 CYP21A2P08686 494 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 MAGEA4P43358 317 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 MMGT1Q8N4V1 131 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 NACC2Q96BF6 587 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 TNIP3Q96KP6 325 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 RBM12Q9NTZ6 932 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 P4HA2O15460 535 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 TRMT5Q32P41 509 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 SEL1L3Q68CR1 1132 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 LIN54Q6MZP7 749 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 OOSP2Q86WS3 158 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ARID3BQ8IVW6 561 aaPredicted RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 GREM2Q9H772 168 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 EFCAB1Q9HAE3 211 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 SLC30A1Q9Y6M5 507 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 TIMM44O43615 452 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 CYP2D6P10635 497 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 PPP2R1BP30154 601 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ESRP1Q6NXG1 681 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 TMEM26Q6ZUK4 368 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 EID3Q8N140 333 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 PAIP1Q9H074 479 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ARMC7Q9H6L4 198 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 TMEM138Q9NPI0 162 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 BAIAP3O94812 1187 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 PGM3O95394 542 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 GPC1P35052 558 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 CACNA2D1P54289 1103 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 DYNLL1P63167 89 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 DYNLL2Q96FJ2 89 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ROPN1BQ9BZX4 212 aaPredicted RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ROPN1Q9HAT0 212 aaPredicted RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 CHKBQ9Y259 395 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ERVV-2B6SEH9 535 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ADD2P35612 726 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ITGA8P53708 1063 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 DDX39BQ13838 428 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 DGKDQ16760 1214 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 KCTD21Q4G0X4 260 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ZNF483Q8TF39 744 aaPredicted RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 LSM7Q9UK45 103 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 RPAP1Q9BWH6 1393 aaPredicted RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 PLEKHA8P1O95397 391 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 DNAJC3Q13217 504 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 FAM98BQ52LJ0 330 aaKnown RBP10.68□□□□□ -0.7
COL4A4-201ENST00000396625 OR2W6PQ8NHA6 318 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 PAK5Q9P286 719 aa10.68□□□□□ -0.7
COL4A4-201ENST00000396625 ZBTB5O15062 677 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 TSPAN19P0C672 248 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PCNAP12004 261 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 RAD23AP54725 363 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 ARL10Q8N8L6 244 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 GDPD5Q8WTR4 605 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 FAM111AQ96PZ2 611 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PDE8BO95263 885 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 ORC2Q13416 577 aaPredicted RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 IL31Q6EBC2 164 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CCDC185Q8N715 623 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 TFB1MQ8WVM0 346 aaKnown RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 TPD52L3Q96J77 140 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 C9orf72Q96LT7 481 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 SERPINB12Q96P63 405 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CYP26A1O43174 497 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 ATP9AO75110 1047 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 MSH3P20585 1137 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 ACLYP53396 1101 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 ABATP80404 500 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CHID1Q9BWS9 393 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 MGAT4DA6NG13 374 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 SLC16A3O15427 465 aaKnown RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 ATG7O95352 703 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 BTN3A2P78410 334 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 EPS8Q12929 822 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 NAA30Q147X3 362 aaPredicted RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PGBD3Q8N328 593 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PJA1Q8NG27 643 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 TMEM117Q9H0C3 514 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 CATSPERBQ9H7T0 1116 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 COPS7BQ9H9Q2 264 aaPredicted RBP10.67□□□□□ -0.7
COL4A4-201ENST00000396625 FBXO40Q9UH90 709 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 PHF11Q9UIL8 331 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 AREL1O15033 823 aa10.67□□□□□ -0.7
COL4A4-201ENST00000396625 HSF2Q03933 536 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms