RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TSC1Q92574 1164 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 C11orf84Q9BUA3 381 aaPredicted RBP13.39□□□□□ -0.27
TRIM39-204ENST00000396548 SELENOOQ9BVL4 669 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 MIS12Q9H081 205 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 PRG3Q9Y2Y8 225 aaPredicted RBP13.39□□□□□ -0.27
TRIM39-204ENST00000396548 F8VP50 259 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 PIK3R2O00459 728 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 TCF4P15884 667 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 BCAR1P56945 870 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 PIGHQ14442 188 aaPredicted RBP13.39□□□□□ -0.27
TRIM39-204ENST00000396548 PIGZQ86VD9 579 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 SCUBE3Q8IX30 993 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 NOA1Q8NC60 698 aaKnown RBP13.39□□□□□ -0.27
TRIM39-204ENST00000396548 CLEC4CQ8WTT0 213 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 MYLPFQ96A32 169 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 VN1R3Q9BXE9 311 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 IL23AQ9NPF7 189 aa13.39□□□□□ -0.27
TRIM39-204ENST00000396548 GOLGA8SH3BPF8 625 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 DPYSL4O14531 572 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 RAG1P15918 1043 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 YWHAHQ04917 246 aaPredicted RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 TAF5Q15542 800 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 MNS1Q8NEH6 495 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 SPATA4Q8NEY3 305 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 IPO4Q8TEX9 1081 aaKnown RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 COLEC11Q9BWP8 271 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 PRDM5Q9NQX1 630 aaPredicted RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 FAN1Q9Y2M0 1017 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 KIAA0100Q14667 2235 aaKnown RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 CTAGE15A4D2H0 777 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 EFCAB14O75071 495 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 TADA2AO75478 443 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 CTAGE8P0CG41 777 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 PYGMP11217 842 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 ACADSBP45954 432 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 DNA2P51530 1060 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 ERCC6LQ2NKX8 1250 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 CFAP221Q4G0U5 840 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 BHLHA9Q7RTU4 235 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 CTAGE6Q86UF2 777 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 CTAGE4Q8IX94 777 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 RHOBTB2Q9BYZ6 727 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 KRT82Q9NSB4 513 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 TRAPPC3O43617 180 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 ZNF143P52747 638 aaPredicted RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 SLC25A11Q02978 314 aaKnown RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 LRRC38Q5VT99 294 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 AADACL2Q6P093 401 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 SLC26A9Q7LBE3 791 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 TAS1R1Q7RTX1 841 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 TMCO2Q7Z6W1 182 aaPredicted RBP13.38□□□□□ -0.27
TRIM39-204ENST00000396548 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 MMGT1Q8N4V1 131 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 EMC1Q8N766 993 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 UBL4BQ8N7F7 174 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.274e-7■■□□□ 14.2
TRIM39-204ENST00000396548 SYNCQ9H7C4 482 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
TRIM39-204ENST00000396548 SPOPO43791 374 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 AMHP03971 560 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 LINC00271P0C7V0 271 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 FAM200BP0CF97 657 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
TRIM39-204ENST00000396548 FUT10Q6P4F1 479 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 CYP4V2Q6ZWL3 525 aaPredicted RBP13.37□□□□□ -0.27
TRIM39-204ENST00000396548 GPRIN1Q7Z2K8 1008 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 BNIPLQ7Z465 357 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.37□□□□□ -0.27
TRIM39-204ENST00000396548 GOLGA1Q92805 767 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 SMARCD1Q96GM5 515 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 KCNK16Q96T55 309 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM39-204ENST00000396548 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
TRIM39-204ENST00000396548 ACRP10323 421 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 FLT3P36888 993 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 PBX3P40426 434 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 MAP3K7CLP57077 242 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 ACAP1Q15027 740 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 CCDC14Q49A88 953 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 OR6B2Q6IFH4 312 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 KATNAL2Q8IYT4 538 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 ZDHHC14Q8IZN3 488 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 RNPC3Q96LT9 517 aaKnown RBP13.37□□□□□ -0.27
TRIM39-204ENST00000396548 ADAM33Q9BZ11 813 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 ANKZF1Q9H8Y5 726 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 GREB1Q4ZG55 1949 aa13.37□□□□□ -0.27
TRIM39-204ENST00000396548 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM39-204ENST00000396548 LRCH4O75427 683 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 AP1G2O75843 785 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 UPP2O95045 317 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 C2orf54Q08AI8 447 aa13.36□□□□□ -0.27
TRIM39-204ENST00000396548 CC2D1AQ6P1N0 951 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 RSPO2Q6UXX9 243 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-204ENST00000396548 ANKS1BQ7Z6G8 1248 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms