RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ANXA13P27216 316 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 CXCL12P48061 93 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 AP3M2P53677 418 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 DMWDQ09019 674 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 ORC1Q13415 861 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 CCINQ13939 588 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 ZNF268Q14587 947 aaPredicted RBP19.5■□□□□ 0.71
FXN-203ENST00000396366 ZNF667Q5HYK9 610 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 NAIF1Q69YI7 327 aaPredicted RBP19.5■□□□□ 0.71
FXN-203ENST00000396366 MAMSTRQ6ZN01 415 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 B3GALNT2Q8NCR0 500 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 C8orf48Q96LL4 319 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 VRTNQ9H8Y1 702 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 KIF9Q9HAQ2 790 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 FBRSL1Q9HCM7 1045 aaKnown RBP19.5■□□□□ 0.71
FXN-203ENST00000396366 TRAF3IP3Q9Y228 551 aa19.5■□□□□ 0.71
FXN-203ENST00000396366 DMXL1Q9Y485 3027 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 CALUO43852 315 aaPredicted RBP19.49■□□□□ 0.71
FXN-203ENST00000396366 HDCP19113 662 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 ZXDBP98169 803 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 FAM160A1Q05DH4 1040 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 LRRC32Q14392 662 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 MTF1Q14872 753 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 ZNF77Q15935 545 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 ZACNQ401N2 412 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 DGKKQ5KSL6 1271 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 CC2D1AQ6P1N0 951 aaPredicted RBP19.49■□□□□ 0.71
FXN-203ENST00000396366 C1orf228Q6PIY5 440 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 PAQR9Q6ZVX9 377 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 SV2AQ7L0J3 742 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 SPEM1Q8N4L4 309 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 KCNK16Q96T55 309 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 RNF38Q9H0F5 515 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 LINC00597Q9H2U6 94 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 WNT6Q9Y6F9 365 aa19.49■□□□□ 0.71
FXN-203ENST00000396366 ATG2BQ96BY7 2078 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 TRIM66O15016 1216 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 AKAP3O75969 853 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 CCR3P51677 355 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 NOP14P78316 857 aaKnown RBP19.48■□□□□ 0.71
FXN-203ENST00000396366 IFRD2Q12894 506 aaPredicted RBP19.48■□□□□ 0.71
FXN-203ENST00000396366 TAF10Q12962 218 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 SGSM1Q2NKQ1 1148 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 FSTL4Q6MZW2 842 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 PKN3Q6P5Z2 889 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 ACOT1Q86TX2 421 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 SMYD4Q8IYR2 804 aaPredicted RBP19.48■□□□□ 0.71
FXN-203ENST00000396366 KIAA2013Q8IYS2 634 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 TMC2Q8TDI7 906 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 SH3RF2Q8TEC5 729 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 HINFPQ9BQA5 517 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 TTLL2Q9BWV7 592 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 DUS2Q9NX74 493 aaKnown RBP19.48■□□□□ 0.71
FXN-203ENST00000396366 TRPM5Q9NZQ8 1165 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 FRMD4BQ9Y2L6 1034 aa19.48■□□□□ 0.71
FXN-203ENST00000396366 ZNF840PA6NDX5 716 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 ABL1P00519 1130 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 TRIM49P0CI25 452 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 TRIM49CP0CI26 452 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 NR2F2P24468 414 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 GALK1P51570 392 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 VAMP7P51809 220 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 PNOCQ13519 176 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 KCNB1Q14721 858 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 OSCP1Q8WVF1 389 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 RUBCNQ92622 972 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 CCDC47Q96A33 483 aaKnown RBP19.47■□□□□ 0.71
FXN-203ENST00000396366 EEF2KMTQ96G04 330 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 CEP295NLQ96MC4 621 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 IER2Q9BTL4 223 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 MED10Q9BTT4 135 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 ELOVL4Q9GZR5 314 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 HMGXB4Q9UGU5 601 aa19.47■□□□□ 0.71
FXN-203ENST00000396366 CHURC1-FNTBB4DL54 471 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 K7ESF4 209 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 IKBKBO14920 756 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 HLA-DRAP01903 254 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 GJA4P35212 333 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 GCLMP48507 274 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 FNTBP49356 437 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 PPP3CAQ08209 521 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 USP4Q13107 963 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 PDGFRLQ15198 375 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 EML3Q32P44 896 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 TMEM196Q5HYL7 178 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 GUF1Q8N442 669 aaKnown RBP19.46■□□□□ 0.71
FXN-203ENST00000396366 EPC1Q9H2F5 836 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 ECT2Q9H8V3 914 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 POLR3BQ9NW08 1133 aaPredicted RBP19.46■□□□□ 0.71
FXN-203ENST00000396366 ARHGAP26Q9UNA1 814 aa19.46■□□□□ 0.71
FXN-203ENST00000396366 HELZP42694 1942 aaKnown RBP19.46■□□□□ 0.71
FXN-203ENST00000396366 DCHS1Q96JQ0 3298 aa19.45■□□□□ 0.7
FXN-203ENST00000396366 LEFTY2O00292 366 aa19.45■□□□□ 0.7
FXN-203ENST00000396366 TRDMT1O14717 391 aaKnown RBP19.45■□□□□ 0.7
FXN-203ENST00000396366 SCAMP3O14828 347 aaKnown RBP19.45■□□□□ 0.7
FXN-203ENST00000396366 KIF20AO95235 890 aa19.45■□□□□ 0.7
FXN-203ENST00000396366 ASS1P00966 412 aaKnown RBP19.45■□□□□ 0.7
FXN-203ENST00000396366 EGFP01133 1207 aa19.45■□□□□ 0.7
FXN-203ENST00000396366 CCDC130P13994 396 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms