RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 HABP4Q5JVS0 413 aaKnown RBP8.77□□□□□ -1.01
NDE1-202ENST00000396355 KLHDC7AQ5VTJ3 777 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 LVRNQ6Q4G3 990 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 PACS1Q6VY07 963 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 ZNF804AQ7Z570 1209 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 CDR2LQ86X02 465 aaPredicted RBP8.77□□□□□ -1.01
NDE1-202ENST00000396355 APOBEC3FQ8IUX4 373 aaKnown RBP8.77□□□□□ -1.01
NDE1-202ENST00000396355 PALM2Q8IXS6 379 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 METTL13Q8N6R0 699 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 GLIS3Q8NEA6 775 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 C1orf54Q8WWF1 131 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 RMDN1Q96DB5 314 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 CEP95Q96GE4 821 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 POLR3CQ9BUI4 534 aaPredicted RBP8.77□□□□□ -1.01
NDE1-202ENST00000396355 CCDC28BQ9BUN5 200 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 SAYSD1Q9NPB0 183 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 FBXO6Q9NRD1 293 aaPredicted RBP8.77□□□□□ -1.01
NDE1-202ENST00000396355 PMF1-BGLAPU3KQ54 211 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 ACSL4O60488 711 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 CDK8P49336 464 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 COPZ1P61923 177 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 PDK1Q15118 436 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 GSTA3Q16772 222 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 SGO2Q562F6 1265 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 KCTD4Q8WVF5 259 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 PPP1R16BQ96T49 567 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 SEMA6BQ9H3T3 888 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 PSTPIP2Q9H939 334 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 ANKFY1Q9P2R3 1169 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 FZD1Q9UP38 647 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 LTBP1Q14766 1721 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 QSER1Q2KHR3 1735 aa8.77□□□□□ -1.01
NDE1-202ENST00000396355 KPNA4O00629 521 aaPredicted RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 PFDN6O15212 129 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 ARHGEF9O43307 516 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 SLC37A4O43826 429 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 PIAS1O75925 651 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 EPN2O95208 641 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 OR52Z1P0C646 297 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 FAM58BPP0C7Q3 252 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 VCLP18206 1134 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 AMPD1P23109 780 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 BTDP43251 543 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 GEMIN4P57678 1058 aaKnown RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 CENPCQ03188 943 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 FOLH1Q04609 750 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 USH1GQ495M9 461 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 DUS1LQ6P1R4 473 aaKnown RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 CCDC137Q6PK04 289 aaKnown RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 C16orf86Q6ZW13 317 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 MCF2L2Q86YR7 1114 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 ELMOD2Q8IZ81 293 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 ELMO1Q92556 727 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 P2RX5Q93086 422 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TAMM41Q96BW9 452 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 PIGSQ96S52 555 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 CHID1Q9BWS9 393 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 HEMGNQ9BXL5 484 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TMEM206Q9H813 350 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 C8orf4Q9NR00 106 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 RSL24D1Q9UHA3 163 aaKnown RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 SLX4Q8IY92 1834 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 C2orf71A6NGG8 1288 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TCP10L2B9ZVM9 353 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 CYP26A1O43174 497 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TPST1O60507 370 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 DGKIO75912 1065 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 PSMC3P17980 439 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 CD97P48960 835 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 BLVRAP53004 296 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 IL1RL1Q01638 556 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 PLOD1Q02809 727 aaPredicted RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 TNFAIP1Q13829 316 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 RIPOR1Q6ZS17 1223 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 BNIPLQ7Z465 357 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 CD302Q8IX05 232 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 RDH13Q8NBN7 331 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TBCKQ8TEA7 893 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 WRNIP1Q96S55 665 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TIMMDC1Q9NPL8 285 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 BLOC1S4Q9NUP1 217 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 SIK3Q9Y2K2 1263 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.76□□□□□ -1.01
NDE1-202ENST00000396355 A0A1W2PQ67 120 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 SMCO2A6NFE2 343 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 A8MX80 341 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TIMM44O43615 452 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 DEAF1O75398 565 aaPredicted RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 MT-ND3P03897 115 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 RAG1P15918 1043 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 MSX2P35548 267 aaPredicted RBP8.76□□□□□ -1.01
NDE1-202ENST00000396355 ETFBP38117 255 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 FKBP1BP68106 108 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 TRPC3Q13507 836 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 PLS1Q14651 629 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 GPR107Q5VW38 600 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 CCDC81Q6ZN84 652 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 JAMLQ86YT9 394 aa8.76□□□□□ -1.01
NDE1-202ENST00000396355 FNDC8Q8TC99 324 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms