RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 IFNKQ9P0W0 207 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 PRKAG3Q9UGI9 489 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 TSPAN16Q9UKR8 245 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 NR2E1Q9Y466 385 aa20.33■□□□□ 0.85
HOXA9-202ENST00000396345 A0A1W2PQC6 194 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 O00370 1275 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 CYP26A1O43174 497 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 FGF19O95750 216 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 PNMA6AP0CW24 399 aaPredicted RBP20.32■□□□□ 0.84
HOXA9-202ENST00000396345 NPR3P17342 541 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 SP100P23497 879 aaPredicted RBP20.32■□□□□ 0.84
HOXA9-202ENST00000396345 GNA15P30679 374 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 CCR2P41597 374 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 STILQ15468 1287 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 CNGA2Q16280 664 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 SLC5A9Q2M3M2 681 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 PRSS36Q5K4E3 855 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 OTOP3Q7RTS5 596 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 ADHFE1Q8IWW8 467 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 FAM71AQ8IYT1 594 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 ANKRD52Q8NB46 1076 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 TCEAL4Q96EI5 215 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 RPGRIP1Q96KN7 1286 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 ZSWIM1Q9BR11 485 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 GPR88Q9GZN0 384 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 NLRC4Q9NPP4 1024 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 HESX1Q9UBX0 185 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 C5orf42Q9H799 3197 aa20.32■□□□□ 0.84
HOXA9-202ENST00000396345 GREB1Q4ZG55 1949 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 GABRR2P28476 465 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 GBP2P32456 591 aaPredicted RBP20.31■□□□□ 0.84
HOXA9-202ENST00000396345 BCAT1P54687 386 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 SLC8A3P57103 927 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 LCLAT1Q6UWP7 414 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 TTC30AQ86WT1 665 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 NUP93Q8N1F7 819 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 ING5Q8WYH8 240 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 TRMT2BQ96GJ1 504 aaKnown RBP20.31■□□□□ 0.84
HOXA9-202ENST00000396345 MYRFLQ96LU7 910 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 ACP6Q9NPH0 428 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.31■□□□□ 0.84
HOXA9-202ENST00000396345 EHD2Q9NZN4 543 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 UXTQ9UBK9 157 aaPredicted RBP20.31■□□□□ 0.84
HOXA9-202ENST00000396345 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.31■□□□□ 0.84
HOXA9-202ENST00000396345 USTQ9Y2C2 406 aa20.31■□□□□ 0.84
HOXA9-202ENST00000396345 F8VZ95 297 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 THAP12O43422 761 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 MED7O43513 233 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 MICAL2O94851 1124 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 RTN3O95197 1032 aaPredicted RBP20.3■□□□□ 0.84
HOXA9-202ENST00000396345 TPM3P06753 285 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 CLCN1P35523 988 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 BPIFB4P59827 614 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 USP46P62068 366 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 PTK2Q05397 1052 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 ZP2Q05996 745 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 GAREM2Q75VX8 874 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 GAS2L3Q86XJ1 694 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 TDRD5Q8NAT2 981 aaKnown RBP20.3■□□□□ 0.84
HOXA9-202ENST00000396345 SHKBP1Q8TBC3 707 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 UBA3Q8TBC4 463 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 ZNF606Q8WXB4 792 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 ACSF2Q96CM8 615 aaPredicted RBP20.3■□□□□ 0.84
HOXA9-202ENST00000396345 GCNAQ96QF7 691 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 MYADMQ96S97 322 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 RBSNQ9H1K0 784 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 ATXN3LQ9H3M9 355 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 IL21Q9HBE4 155 aa20.3■□□□□ 0.84
HOXA9-202ENST00000396345 A0A1W2PRU2 124 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 C2CD4DB7Z1M9 353 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 NRG2O14511 850 aaPredicted RBP20.29■□□□□ 0.84
HOXA9-202ENST00000396345 TNFRSF10BO14763 440 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 CBFA2T2O43439 604 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 MOSPD3O75425 235 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 GJA1P17302 382 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 CEBPBP17676 345 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 CDC25CP30307 473 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 SLC5A3P53794 718 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 JAM2P57087 298 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 BST2Q10589 180 aaKnown RBP20.29■□□□□ 0.84
HOXA9-202ENST00000396345 IFRD2Q12894 506 aaPredicted RBP20.29■□□□□ 0.84
HOXA9-202ENST00000396345 CACNA2D4Q7Z3S7 1137 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 FGF13Q92913 245 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 TTLL2Q9BWV7 592 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 UBXN6Q9BZV1 441 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 XPO4Q9C0E2 1151 aaKnown RBP20.29■□□□□ 0.84
HOXA9-202ENST00000396345 PNPLA8Q9NP80 782 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 COMMD8Q9NX08 183 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 CDH7Q9ULB5 785 aa20.29■□□□□ 0.84
HOXA9-202ENST00000396345 LOC730098B7Z3J9 87 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 HHLA1C9JL84 531 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 M0QYV0 167 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 F11P03951 625 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 SETSIPP0DME0 302 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 YWHAQP27348 245 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 SSTR3P32745 418 aaPredicted RBP20.28■□□□□ 0.84
HOXA9-202ENST00000396345 SOX5P35711 763 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 PBX1P40424 430 aa20.28■□□□□ 0.84
HOXA9-202ENST00000396345 STAT1P42224 750 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms