RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SNX21Q969T3 373 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 C8orf48Q96LL4 319 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 PKMYT1Q99640 499 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 PDCD11Q14690 1871 aaKnown RBP17.45■□□□□ 0.38
DDR1-229ENST00000396342 COL4A3Q01955 1670 aa17.45■□□□□ 0.38
DDR1-229ENST00000396342 MED19A0JLT2 244 aaPredicted RBP17.44■□□□□ 0.38
DDR1-229ENST00000396342 ZBTB24O43167 697 aaPredicted RBP17.44■□□□□ 0.38
DDR1-229ENST00000396342 ALDH1A2O94788 518 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 ADH1CP00326 375 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 EGFP01133 1207 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 DMWDQ09019 674 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 IFRD2Q12894 506 aaPredicted RBP17.44■□□□□ 0.38
DDR1-229ENST00000396342 USP4Q13107 963 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 SRSF5Q13243 272 aaKnown RBP17.44■□□□□ 0.38
DDR1-229ENST00000396342 ZNF77Q15935 545 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 ZNF699Q32M78 642 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 ZNF667Q5HYK9 610 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 SHC4Q6S5L8 630 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 KIAA1958Q8N8K9 716 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 TSTD1Q8NFU3 115 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 RPLP0P6Q8NHW5 317 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 CXorf38Q8TB03 319 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 KBTBD7Q8WVZ9 684 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 PCED1BQ96HM7 432 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 IMPG2Q9BZV3 1241 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 BLZF1Q9H2G9 400 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 SLC39A2Q9NP94 309 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 TBC1D14Q9P2M4 693 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 USP25Q9UHP3 1055 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 FRMD4BQ9Y2L6 1034 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 PCDHGA5Q9Y5G8 931 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.44■□□□□ 0.38
DDR1-229ENST00000396342 CFAP54Q96N23 3096 aa17.44■□□□□ 0.38
DDR1-229ENST00000396342 OTOGLQ3ZCN5 2332 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 DCDC2BA2VCK2 349 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 F8VP50 259 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 F13A1P00488 732 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 TCF3P15923 654 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 YWHAQP27348 245 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 GBP1P32455 592 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 NOP14P78316 857 aaKnown RBP17.43■□□□□ 0.38
DDR1-229ENST00000396342 USP39Q53GS9 565 aaKnown RBP17.43■□□□□ 0.38
DDR1-229ENST00000396342 BTBD8Q5XKL5 378 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 EPM2AIP1Q7L775 607 aaPredicted RBP17.43■□□□□ 0.38
DDR1-229ENST00000396342 SYT13Q7L8C5 426 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 CCDC150Q8NCX0 1101 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 PARD6AQ9NPB6 346 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 CRTAC1Q9NQ79 661 aa17.43■□□□□ 0.38
DDR1-229ENST00000396342 GPR179Q6PRD1 2367 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 C2orf78A6NCI8 922 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.42■□□□□ 0.38
DDR1-229ENST00000396342 LEFTY2O00292 366 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 SLC30A4O14863 429 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 STAU1O95793 577 aaKnown RBP17.42■□□□□ 0.38
DDR1-229ENST00000396342 MBL2P11226 248 aaPredicted RBP17.42■□□□□ 0.38
DDR1-229ENST00000396342 PXNP49023 591 aaPredicted RBP17.42■□□□□ 0.38
DDR1-229ENST00000396342 DGKEP52429 567 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 GOLGA8FQ08AF8 430 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 GOLGA8DPQ0D2H9 430 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 DMC1Q14565 340 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 EML3Q32P44 896 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 C12orf56Q8IXR9 622 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 NUP93Q8N1F7 819 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 B3GALNT2Q8NCR0 500 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 GLIS3Q8NEA6 775 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 FBXO32Q969P5 355 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 FAM84AQ96KN4 292 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 HHIPQ96QV1 700 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 MRPL45Q9BRJ2 306 aaKnown RBP17.42■□□□□ 0.38
DDR1-229ENST00000396342 ARRDC1-AS1Q9H2J1 176 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 GCNT4Q9P109 453 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 SH3BP1Q9Y3L3 701 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 PTPRJQ12913 1337 aa17.42■□□□□ 0.38
DDR1-229ENST00000396342 TICRRQ7Z2Z1 1910 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 ZNF840PA6NDX5 716 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 TGFB1I1O43294 461 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 HCRTO43612 131 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 TADA3O75528 432 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 CST3P01034 146 aaPredicted RBP17.41■□□□□ 0.38
DDR1-229ENST00000396342 RPN1P04843 607 aaKnown RBP17.41■□□□□ 0.38
DDR1-229ENST00000396342 MYL1P05976 194 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 SLFN14P0C7P3 912 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 MYL6P60660 151 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 TAF10Q12962 218 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 BMT2Q1RMZ1 405 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 RESP18Q5W5W9 173 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 LIMS2Q7Z4I7 341 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 TTC30AQ86WT1 665 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 OVCA2Q8WZ82 227 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 CHFRQ96EP1 664 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 TTLL2Q9BWV7 592 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 DMAP1Q9NPF5 467 aaPredicted RBP17.41■□□□□ 0.38
DDR1-229ENST00000396342 VPS45Q9NRW7 570 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
DDR1-229ENST00000396342 PCDHA7Q9UN72 937 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 ATP6V1DQ9Y5K8 247 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 CPQQ9Y646 472 aa17.41■□□□□ 0.38
DDR1-229ENST00000396342 PATJQ8NI35 1801 aa17.4■□□□□ 0.38
DDR1-229ENST00000396342 OTOL1A6NHN0 477 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms