RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 RHOBTB2Q9BYZ6 727 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 TRIM7Q9C029 511 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 ABCB6Q9NP58 842 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 METTL5Q9NRN9 209 aaKnown RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 PACSIN2Q9UNF0 486 aaPredicted RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 ALG6Q9Y672 507 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 SIGLEC16A6NMB1 481 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 LCP1P13796 627 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 ATP2A2P16615 1042 aaKnown RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 RPL7AP62424 266 aaKnown RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 NFE2Q16621 373 aaPredicted RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 PPP1R15BQ5SWA1 713 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 FAM102AQ5T9C2 384 aaPredicted RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 ZDHHC17Q8IUH5 632 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 VN1R3Q9BXE9 311 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 TLR10Q9BXR5 811 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 OXCT2Q9BYC2 517 aaPredicted RBP21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 HYOU1Q9Y4L1 999 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 PCDHB12Q9Y5F1 795 aa21.51■■□□□ 1.03
VCPKMT-202ENST00000395860 TMEM191CA6NGB0 347 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 KIAA1841Q6NSI8 718 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 PRSS55Q6UWB4 352 aaPredicted RBP21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 SCUBE3Q8IX30 993 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 KCTD13Q8WZ19 329 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 KCNK16Q96T55 309 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 RAD9AQ99638 391 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 SAR1BQ9Y6B6 198 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 PATJQ8NI35 1801 aa21.5■■□□□ 1.03
VCPKMT-202ENST00000395860 PAPSS1O43252 624 aaPredicted RBP21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 GABBR2O75899 941 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 SOD2P04179 222 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 CPB1P15086 417 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 COMTP21964 271 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 PPM1AP35813 382 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 CACNA2D1P54289 1103 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 ARPP19P56211 112 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 AMPD2Q01433 879 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 RPS6KA1Q15418 735 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 ZMIZ2Q8NF64 920 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 RIN2Q8WYP3 895 aaPredicted RBP21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 LRRC4Q9HBW1 653 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 CSNK1G1Q9HCP0 422 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 IP6K2Q9UHH9 426 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 LCMT1Q9UIC8 334 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 SNX12Q9UMY4 172 aa21.49■■□□□ 1.03
VCPKMT-202ENST00000395860 TLL1O43897 1013 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 TBC1D4O60343 1298 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 DNA2P51530 1060 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 SLC6A3Q01959 620 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 ADIGQ0VDE8 80 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 DDX53Q86TM3 631 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 HERC2P3Q9BVR0 1158 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 UBXN6Q9BZV1 441 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 DMAP1Q9NPF5 467 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 CHST7Q9NS84 486 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 TMEM30AQ9NV96 361 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 ABI2Q9NYB9 513 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 NR2E3Q9Y5X4 410 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 SPOPO43791 374 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 PROSCO94903 275 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 RFC1P35251 1148 aaPredicted RBP21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 RABGGTBP53611 331 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 TUBB2AQ13885 445 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 PSMD5Q16401 504 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 OLFML1Q6UWY5 402 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 SIX6OS1Q8N1H7 587 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 JOSD2Q8TAC2 188 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 PIK3R5Q8WYR1 880 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 FUBP3Q96I24 572 aaKnown RBP eCLIP21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 PIWIL1Q96J94 861 aaKnown RBP21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 TUBB2BQ9BVA1 445 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 PCDHB5Q9Y5E4 795 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 MRFAP1Q9Y605 127 aa21.48■■□□□ 1.03
VCPKMT-202ENST00000395860 PRLRP16471 622 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 CYP2F1P24903 491 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 GRIK1P39086 918 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 SLC1A1P43005 524 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 RNASE9P60153 205 aaKnown RBP21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 CFAP221Q4G0U5 840 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 RSPO2Q6UXX9 243 aaPredicted RBP21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 HES6Q96HZ4 224 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 PGLYRP2Q96PD5 576 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 PSMB7Q99436 277 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 MTRRQ9UBK8 725 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 CDC23Q9UJX2 597 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 CDY1Q9Y6F8 540 aa21.47■■□□□ 1.03
VCPKMT-202ENST00000395860 C2CD2LO14523 706 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 SRGAP2O75044 1071 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 TCP1P17987 556 aaKnown RBP21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 GLUD2P49448 558 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 TKTL1P51854 596 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 KRT17Q04695 432 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 GPR17Q13304 367 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 RASIP1Q5U651 963 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 EMC1Q8N766 993 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 FBXO22Q8NEZ5 403 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 SP7Q8TDD2 431 aaPredicted RBP21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 CLEC4CQ8WTT0 213 aa21.46■■□□□ 1.03
VCPKMT-202ENST00000395860 UBE2Q2Q8WVN8 375 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms