RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 MAPRE1Q15691 268 aaKnown RBP17.25■□□□□ 0.35
CXCL12-206ENST00000395795 NFIL3Q16649 462 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 ZCWPW2Q504Y3 356 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 C1orf228Q6PIY5 440 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 OR6B3Q8NGW1 331 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 TMC2Q8TDI7 906 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 SNX25Q9H3E2 840 aa17.25■□□□□ 0.35
CXCL12-206ENST00000395795 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
CXCL12-206ENST00000395795 ZNF840PA6NDX5 716 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 TRDMT1O14717 391 aaKnown RBP17.24■□□□□ 0.35
CXCL12-206ENST00000395795 GRIK1P39086 918 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 CCR3P51677 355 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 TNNC1P63316 161 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 NCOA4Q13772 614 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 GAB4Q2WGN9 574 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 DGKKQ5KSL6 1271 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 DENND5BQ6ZUT9 1274 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 SV2AQ7L0J3 742 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 FSIP1Q8NA03 581 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 B3GALNT2Q8NCR0 500 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 RUBCNQ92622 972 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 SYAP1Q96A49 352 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-206ENST00000395795 FAM126AQ9BYI3 521 aaPredicted RBP17.24■□□□□ 0.35
CXCL12-206ENST00000395795 RNF38Q9H0F5 515 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 LINC00597Q9H2U6 94 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 THG1LQ9NWX6 298 aaKnown RBP17.24■□□□□ 0.35
CXCL12-206ENST00000395795 IL37Q9NZH6 218 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 HMGXB4Q9UGU5 601 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 ARHGAP26Q9UNA1 814 aa17.24■□□□□ 0.35
CXCL12-206ENST00000395795 A8MXQ7 604 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 TNFRSF10BO14763 440 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 AKAP3O75969 853 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 ZNF202O95125 648 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 ASS1P00966 412 aaKnown RBP17.23■□□□□ 0.35
CXCL12-206ENST00000395795 OAS1P00973 400 aaKnown RBP17.23■□□□□ 0.35
CXCL12-206ENST00000395795 USP17L7P0C7H9 530 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 CXCL12P48061 93 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 AP3M2P53677 418 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 TRPC3Q13507 836 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 MTF1Q14872 753 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 ZNF699Q32M78 642 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 EML3Q32P44 896 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 SPOPLQ6IQ16 392 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 ZMIZ2Q8NF64 920 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 OSCP1Q8WVF1 389 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 ATRIPQ8WXE1 791 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 KCNK16Q96T55 309 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 APOBEC3GQ9HC16 384 aaKnown RBP17.23■□□□□ 0.35
CXCL12-206ENST00000395795 TRPC7Q9HCX4 862 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
CXCL12-206ENST00000395795 WNT6Q9Y6F9 365 aa17.23■□□□□ 0.35
CXCL12-206ENST00000395795 HELZP42694 1942 aaKnown RBP17.22■□□□□ 0.35
CXCL12-206ENST00000395795 TRAV19A0A0A6YYK7 116 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 TRIM66O15016 1216 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 MAPK13O15264 365 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 HRO43593 1189 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 GJA4P35212 333 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 ASPAP45381 313 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 PPP3CAQ08209 521 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 LRRC32Q14392 662 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 KCNB1Q14721 858 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 PDGFRLQ15198 375 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 ZNF667Q5HYK9 610 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 FUKQ8N0W3 1084 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 SYNPOQ8N3V7 929 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 SH3RF2Q8TEC5 729 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 ELOVL4Q9GZR5 314 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 SCAND2PQ9GZW5 306 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-206ENST00000395795 ECT2Q9H8V3 914 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 POLR3BQ9NW08 1133 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-206ENST00000395795 SMG5Q9UPR3 1016 aaKnown RBP17.22■□□□□ 0.35
CXCL12-206ENST00000395795 MAPK8IP1Q9UQF2 711 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 CEP250Q9BV73 2442 aa17.22■□□□□ 0.35
CXCL12-206ENST00000395795 ANTXRLA6NF34 631 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 CHURC1-FNTBB4DL54 471 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 IKBKBO14920 756 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 PHACTR2O75167 634 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 BEST1O76090 585 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 EGFP01133 1207 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 CHRM1P11229 460 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-206ENST00000395795 HDCP19113 662 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 HOXA6P31267 233 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 FNTBP49356 437 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 PGFP49763 221 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 GALK1P51570 392 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 SLC7A9P82251 487 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 TAF10Q12962 218 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 BIRC3Q13489 604 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 SCARA5Q6ZMJ2 495 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 FAM35AQ86V20 835 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 KIAA2013Q8IYS2 634 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 FMR1NBQ8N0W7 255 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-206ENST00000395795 CRYBG2Q8N1P7 616 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 GUF1Q8N442 669 aaKnown RBP17.21■□□□□ 0.35
CXCL12-206ENST00000395795 ENGASEQ8NFI3 743 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 RMDN1Q96DB5 314 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 ZFRQ96KR1 1074 aaKnown RBP17.21■□□□□ 0.35
CXCL12-206ENST00000395795 TWNKQ96RR1 684 aa17.21■□□□□ 0.35
CXCL12-206ENST00000395795 DMXL1Q9Y485 3027 aa17.21■□□□□ 0.34
CXCL12-206ENST00000395795 FAM92AA1XBS5 289 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms