RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CD52P31358 61 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 CTCFP49711 727 aaPredicted RBP16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 SULT1E1P49888 294 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 SNX17Q15036 470 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 PPM1NQ8N819 430 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 MORC4Q8TE76 937 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 STMN4Q9H169 189 aaPredicted RBP16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 TXNDC16Q9P2K2 825 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 MYADML2A6NDP7 307 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 NCAM1P13591 858 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 ITKQ08881 620 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 CAVIN3Q969G5 261 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 ASB7Q9H672 318 aa16.65■□□□□ 0.26
SMARCD1-202ENST00000394963 SLC4A1P02730 911 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 MDH1P40925 334 aaKnown RBP16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 MAGEA4P43358 317 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 OR1G1P47890 313 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 DNAAF3Q8N9W5 541 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 CCDC110Q8TBZ0 833 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 TRAIPQ9BWF2 469 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 UBQLN1Q9UMX0 589 aaKnown RBP16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 CAPN7Q9Y6W3 813 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 DNAJC25-GNG10A0A024R161 153 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 IGKV6D-21A0A0A0MT36 114 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 M0QYT0 321 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 PECAM1P16284 738 aaPredicted RBP16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 ATP2A2P16615 1042 aaKnown RBP16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 DUPD1Q68J44 220 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 APOL2Q9BQE5 337 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 HOMER3Q9NSC5 361 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 DDX43Q9NXZ2 648 aaKnown RBP16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 ST3GAL5Q9UNP4 418 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 NRCAMQ92823 1304 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 SMIM28A0A1B0GU29 152 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 TMEM191CA6NGB0 347 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 SCAMP3O14828 347 aaKnown RBP16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 CREB1P16220 341 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 AFF1P51825 1210 aaKnown RBP16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 ROR1Q01973 937 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 GHRHRQ02643 423 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 LMNB2Q03252 620 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 TAF12Q16514 161 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 SDHAF4Q5VUM1 108 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 CST9Q5W186 159 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 ARHGEF18Q6ZSZ5 1173 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 CENPUQ71F23 418 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 IQCKQ8N0W5 287 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 FAM169AQ9Y6X4 670 aa16.64■□□□□ 0.25
SMARCD1-202ENST00000394963 C2CD2LO14523 706 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 B4GALT4O60513 344 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 AOC2O75106 756 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 HSPA9P38646 679 aaKnown RBP16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 FASTKD3Q14CZ7 662 aaKnown RBP16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 HIF1AQ16665 826 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 C3orf20Q8ND61 904 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 CCT8L2Q96SF2 557 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 LBHD1Q9BQE6 289 aaPredicted RBP16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 SLC13A1Q9BZW2 595 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 CYTH4Q9UIA0 394 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 XPO7Q9UIA9 1087 aaKnown RBP16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 LCMT1Q9UIC8 334 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 GABRQQ9UN88 632 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 AVILO75366 819 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 LRCH4O75427 683 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 AP1G2O75843 785 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 BRCC3P46736 316 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 C3orf62Q6ZUJ4 267 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 RASGEF1CQ8N431 466 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 SHCBP1Q8NEM2 672 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 GPR152Q8TDT2 470 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 DDX27Q96GQ7 796 aaKnown RBP16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 TMPRSS4Q9NRS4 437 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 UBP1Q9NZI7 540 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 CYP1A1P04798 512 aaPredicted RBP16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 AKR1A1P14550 325 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 IL1R2P27930 398 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 MAN1A1P33908 653 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 SNX16P57768 344 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 CACNA2D3Q8IZS8 1091 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 EXD1Q8NHP7 514 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 DEPDC1BQ8WUY9 529 aa16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 ABI2Q9NYB9 513 aaPredicted RBP16.63■□□□□ 0.25
SMARCD1-202ENST00000394963 DOCK3Q8IZD9 2030 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 LGR5O75473 907 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 DARSP14868 501 aaKnown RBP16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 NDUFV1P49821 464 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 ZBTB16Q05516 673 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 C6orf118Q5T5N4 469 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 GKAP1Q5VSY0 366 aaPredicted RBP16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 MICALCLQ6ZW33 695 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 ANKRD23Q86SG2 305 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 GTF3C2Q8WUA4 911 aaPredicted RBP16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 ZNF560Q96MR9 790 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 SLITRK1Q96PX8 696 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 XYLT2Q9H1B5 865 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 TMBIM4Q9HC24 238 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 AVENQ9NQS1 362 aaPredicted RBP16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 KRT82Q9NSB4 513 aa16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 MYO18AQ92614 2054 aaKnown RBP16.62■□□□□ 0.25
SMARCD1-202ENST00000394963 SLC15A5A6NIM6 579 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms