RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 PKN3Q6P5Z2 889 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 ZPBP2Q6X784 338 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 C11orf74Q86VG3 221 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 IFNLR1Q8IU57 520 aaPredicted RBP11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 ELMOD1Q8N336 334 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 CHCHD4Q8N4Q1 142 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 LEMD2Q8NC56 503 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 CPB2Q96IY4 423 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 CBWD1Q9BRT8 395 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 GPR88Q9GZN0 384 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 CCDC113Q9H0I3 377 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 FZD8Q9H461 694 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 KIAA1586Q9HCI6 787 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 PRMT7Q9NVM4 692 aaPredicted RBP11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 BACE2Q9Y5Z0 518 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 STYXL1Q9Y6J8 313 aa11.85□□□□□ -0.51
VTI1BP2-201ENST00000394154 UPK3BL1B0FP48 263 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 TISP43B9A030 160 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 UPK3BL2E5RIL1 263 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 TK2O00142 265 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 ACKR2O00590 384 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 LDHAP00338 332 aaKnown RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 TPM1P09493 284 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 PLA2G2AP14555 144 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 ADSSP30520 456 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 PBX1P40424 430 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 IRX4P78413 519 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 PRPF4BQ13523 1007 aaKnown RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 FAM187BQ17R55 369 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 IQCEQ6IPM2 695 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 SLC39A4Q6P5W5 647 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 ANKS3Q6ZW76 656 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 INTS8Q75QN2 995 aaKnown RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 CCDC186Q7Z3E2 898 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 CYP2U1Q7Z449 544 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 RAB44Q7Z6P3 723 aaPredicted RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 ZNF461Q8TAF7 563 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 UBL7Q96S82 380 aaPredicted RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 ACO2Q99798 780 aaKnown RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 TARS2Q9BW92 718 aaKnown RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 SLITRK6Q9H5Y7 841 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 IGSF5Q9NSI5 407 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 KLK14Q9P0G3 267 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 PARP2Q9UGN5 583 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 AGO2Q9UKV8 859 aaKnown RBP11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 ITIH6Q6UXX5 1313 aa11.84□□□□□ -0.51
VTI1BP2-201ENST00000394154 CELSR3Q9NYQ7 3312 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 ZNF233A6NK53 670 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 PATE3B3GLJ2 98 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 DCLK1O15075 740 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 CLDN3O15551 220 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 MEFVO15553 781 aaPredicted RBP11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 MOSPD3O75425 235 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 TOM1L1O75674 476 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 GBP1P32455 592 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 MBTD1Q05BQ5 628 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 TRIM14Q14142 442 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 ARHGAP29Q52LW3 1261 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 TCERG1LQ5VWI1 586 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 PMS2CLQ68D20 193 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 PIP4P1Q86T03 277 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 USP37Q86T82 979 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 LURAP1LQ8IV03 231 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 TCEAL8Q8IYN2 117 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 GPD1LQ8N335 351 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 RDH13Q8NBN7 331 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 IQCDQ96DY2 449 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 PRIMPOLQ96LW4 560 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 PCMTD1Q96MG8 357 aaPredicted RBP11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 HHIPQ96QV1 700 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 ERGIC2Q96RQ1 377 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 TCHPQ9BT92 498 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 NUP58Q9BVL2 599 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 EVLQ9UI08 416 aaPredicted RBP11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 INSL5Q9Y5Q6 135 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 TENM4Q6N022 2769 aa11.83□□□□□ -0.52
VTI1BP2-201ENST00000394154 A0A0B4J269 797 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 GOLGA8IPA6NC78 632 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 GOLGA8JA6NMD2 632 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 KALRNO60229 2985 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 STX10O60499 249 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ABLIM3O94929 683 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 PRB1P04280 392 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 MYL4P12829 197 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ATF2P15336 505 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 VAMP7P51809 220 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 EPHA5P54756 1037 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ROR1Q01973 937 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 ENPEPQ07075 957 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 BFSP1Q12934 665 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 TBX2Q13207 712 aaPredicted RBP11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 SEMA3BQ13214 749 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 SYCP1Q15431 976 aa11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 SNRNP35Q16560 246 aaKnown RBP11.82□□□□□ -0.52
VTI1BP2-201ENST00000394154 DCAF17Q5H9S7 520 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms