RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 CDH8P55286 799 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ARL4CP56559 192 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 OTUD4Q01804 1114 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 GRB14Q14449 540 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 RASA2Q15283 850 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 HIF1AQ16665 826 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 FAM110CQ1W6H9 321 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 RNASEH2BQ5TBB1 312 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 NOTUMQ6P988 496 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SLC27A1Q6PCB7 646 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ANKS1BQ7Z6G8 1248 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 UNC93AQ86WB7 457 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 VSIG1Q86XK7 387 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ZDHHC17Q8IUH5 632 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CCDC13Q8IYE1 715 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 LRRC52Q8N7C0 313 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ATP11CQ8NB49 1132 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 KCTD6Q8NC69 237 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 BEST2Q8NFU1 509 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ACTL9Q8TC94 416 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 USP6NLQ92738 828 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 C9orf72Q96LT7 481 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TWNKQ96RR1 684 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TBCBQ99426 244 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PRMT1Q99873 361 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 MAK16Q9BXY0 300 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 KATNBL1Q9H079 304 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 KCNK9Q9NPC2 374 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 DNAJC17Q9NVM6 304 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 HESX1Q9UBX0 185 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 FETUBQ9UGM5 382 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SLC24A2Q9UI40 661 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CYTH4Q9UIA0 394 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TSPAN16Q9UKR8 245 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 NRCAMQ92823 1304 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CFAP69A5D8W1 941 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 GLTPD2A6NH11 291 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 BTBD19C9JJ37 291 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ANKRD65E5RJM6 399 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 DPYSL4O14531 572 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PRPSAP2O60256 369 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 NPTXRO95502 500 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TRUB2O95900 331 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PECAM1P16284 738 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 MIPP30301 263 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 AXLP30530 894 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 STIP1P31948 543 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 STX2P32856 288 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 DYNLT1P63172 113 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ACVR2BQ13705 512 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PDK2Q15119 407 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TMED2Q15363 201 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 QPCTQ16769 361 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SMTNL2Q2TAL5 461 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 KLHL38Q2WGJ6 581 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CCDC38Q502W7 563 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 GJC2Q5T442 439 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 UBAP2Q5T6F2 1119 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TXNRD3NBQ6F5E7 133 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 OR6B2Q6IFH4 312 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CYP4F22Q6NT55 531 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CATSPER4Q7RTX7 472 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 GPR142Q7Z601 462 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PLEKHH3Q7Z736 793 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SESTD1Q86VW0 696 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CMASQ8NFW8 434 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TEKT4Q8WW24 435 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PRCCQ92733 491 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 HAUS1Q96CS2 278 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ZBTB10Q96DT7 871 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 MAML3Q96JK9 1138 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SNX27Q96L92 541 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 ZNF560Q96MR9 790 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TINF2Q9BSI4 451 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 TMEM121Q9BTD3 319 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 CALN1Q9BXU9 219 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 FRMD8Q9BZ67 464 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 KDM4CQ9H3R0 1056 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 VPS37BQ9H9H4 285 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 PSMC3IPQ9P2W1 217 aaPredicted RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 HMGXB4Q9UGU5 601 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 USP18Q9UMW8 372 aa7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SMG5Q9UPR3 1016 aaKnown RBP7.54□□□□□ -1.2
SMAD1-202ENST00000394092 SLC15A5A6NIM6 579 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 C2CD4BA6NLJ0 364 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 ZNF487B1APH4 448 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 RASA4BC9J798 803 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 ALOX15BO15296 676 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 RASA4O43374 803 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 ECM2O94769 699 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 SNAI1O95863 264 aaPredicted RBP7.53□□□□□ -1.2
SMAD1-202ENST00000394092 GSTA1P08263 222 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 TGM2P21980 687 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 IL1R2P27930 398 aa7.53□□□□□ -1.2
SMAD1-202ENST00000394092 SDC4P31431 198 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms