RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 CACNA2D1P54289 1103 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 STX17P56962 302 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 USP46P62068 366 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 TXNDC8Q6A555 127 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 YAF2Q8IY57 180 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 CELF5Q8N6W0 485 aaKnown RBP12.57□□□□□ -0.4
RFC4-202ENST00000392481 MLKLQ8NB16 471 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 LRRC3BQ96PB8 259 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 GBP4Q96PP9 640 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 MED10Q9BTT4 135 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 DDX23Q9BUQ8 820 aaKnown RBP12.57□□□□□ -0.4
RFC4-202ENST00000392481 DMAP1Q9NPF5 467 aaPredicted RBP12.57□□□□□ -0.4
RFC4-202ENST00000392481 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 WDR87Q6ZQQ6 2873 aa12.57□□□□□ -0.4
RFC4-202ENST00000392481 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 MYH10P35580 1976 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 CHADO15335 359 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 AP1G2O75843 785 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 CD58P19256 250 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 PPP3CCP48454 512 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 FMO5P49326 533 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 MARSP56192 900 aaKnown RBP12.56□□□□□ -0.4
RFC4-202ENST00000392481 ORC1Q13415 861 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 ZNF268Q14587 947 aaPredicted RBP12.56□□□□□ -0.4
RFC4-202ENST00000392481 ARHGAP29Q52LW3 1261 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 C12orf29Q8N999 325 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 BPIFB1Q8TDL5 484 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 WHAMMQ8TF30 809 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 TATDN2Q93075 761 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 TWNKQ96RR1 684 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
RFC4-202ENST00000392481 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
RFC4-202ENST00000392481 NUP62CLQ9H1M0 184 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 KIF9Q9HAQ2 790 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 TDP1Q9NUW8 608 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 TRPM5Q9NZQ8 1165 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 RWDD2AQ9UIY3 292 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 SIT1Q9Y3P8 196 aa12.56□□□□□ -0.4
RFC4-202ENST00000392481 TRAV19A0A0A6YYK7 116 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 KANSL1LA0AUZ9 987 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 ARNTLO00327 626 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 P4HA2O15460 535 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
RFC4-202ENST00000392481 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
RFC4-202ENST00000392481 CCDC130P13994 396 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 GLULP15104 373 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 PFKLP17858 780 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 PDE6CP51160 858 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 MLLT6P55198 1093 aaPredicted RBP12.55□□□□□ -0.4
RFC4-202ENST00000392481 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 CETN1Q12798 172 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 TPRG1Q6ZUI0 275 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 TRIM59Q8IWR1 403 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 PRSS33Q8NF86 280 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 PJA1Q8NG27 643 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 USP13Q92995 863 aaPredicted RBP12.55□□□□□ -0.4
RFC4-202ENST00000392481 SLITRK1Q96PX8 696 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 KCNK16Q96T55 309 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 NELL2Q99435 816 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 OSBPL6Q9BZF3 934 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 SMG9Q9H0W8 520 aaKnown RBP12.55□□□□□ -0.4
RFC4-202ENST00000392481 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 HEBP1Q9NRV9 189 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 THG1LQ9NWX6 298 aaKnown RBP12.55□□□□□ -0.4
RFC4-202ENST00000392481 IL37Q9NZH6 218 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 TICRRQ7Z2Z1 1910 aa12.55□□□□□ -0.4
RFC4-202ENST00000392481 C2orf78A6NCI8 922 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 ZNF840PA6NDX5 716 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 TNFRSF10BO14763 440 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CKMP06732 381 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 USP17L7P0C7H9 530 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 YWHAQP27348 245 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 PTPN5P54829 565 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 TAF10Q12962 218 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CUL2Q13617 745 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 ZNF852Q6ZMS4 543 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CSGALNACT1Q8TDX6 532 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CYFIP2Q96F07 1278 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 SLC22A12Q96S37 553 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 SMOQ99835 787 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 ARID3AQ99856 593 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 COMMD8Q9NX08 183 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 GCNT4Q9P109 453 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 CCL26Q9Y258 94 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 MRPS17Q9Y2R5 130 aaKnown RBP12.54□□□□□ -0.4
RFC4-202ENST00000392481 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
RFC4-202ENST00000392481 COL4A2P08572 1712 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms