RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 BCAT1P54687 386 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 RNASE9P60153 205 aaKnown RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 HSD11B2P80365 405 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 DDX10Q13206 875 aaKnown RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 PREPLQ4J6C6 727 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 ARHGAP15Q53QZ3 475 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 C1QL3Q5VWW1 255 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 JMJD6Q6NYC1 403 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 LVRNQ6Q4G3 990 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 Q6ZSN1 163 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 ZNF280BQ86YH2 543 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 CLASRPQ8N2M8 674 aaKnown RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 Q8TCH9 128 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 IPO4Q8TEX9 1081 aaKnown RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 STYXQ8WUJ0 223 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 SNX19Q92543 992 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 GRAMD1AQ96CP6 724 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 LRIG1Q96JA1 1093 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 MPP4Q96JB8 637 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 PPM1MQ96MI6 270 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 KCNC2Q96PR1 638 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 HIST1H2AAQ96QV6 131 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 RTKNQ9BST9 563 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 TTPALQ9BTX7 342 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 INO80BQ9C086 356 aaPredicted RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 SLC25A32Q9H2D1 315 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 PABPC3Q9H361 631 aaKnown RBP3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 UNC45AQ9H3U1 944 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 PRDM16Q9HAZ2 1276 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 GALNT9Q9HCQ5 603 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 HSFX1Q9UBD0 423 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 USP22Q9UPT9 525 aa3.41□□□□□ -1.86
TRAJ40-201ENST00000390497 A0A0B4J269 797 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CCDC196A0A1B0GTZ2 297 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 AQP12BA6NM10 295 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 EIF3FO00303 357 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TRIM38O00635 465 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 FCHO1O14526 889 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 NCAM2O15394 837 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CD3EAPO15446 510 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 EPB41L2O43491 1005 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ASNA1O43681 348 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ACTL6BO94805 426 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 SCAF4O95104 1147 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CFIP05156 583 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PYGLP06737 847 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 C8AP07357 584 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ZSCAN22P10073 491 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PECAM1P16284 738 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 XBP1P17861 261 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ACO1P21399 889 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CD6P30203 668 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 BMPR1AP36894 532 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 MCM2P49736 904 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PDE6CP51160 858 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PGDP52209 483 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ZNF134P52741 427 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 OCA2Q04671 838 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TLE2Q04725 743 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CRHR2Q13324 411 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TUBB3Q13509 450 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CSHL1Q14406 222 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CLCA4Q14CN2 919 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ZNF124Q15973 351 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TRIM60Q495X7 471 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PDCD4Q53EL6 469 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 SULT6B1Q6IMI4 303 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 RAB11FIP2Q7L804 512 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 KCTD20Q7Z5Y7 419 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 MOGAT3Q86VF5 341 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 SLC44A2Q8IWA5 706 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 FTSJ3Q8IY81 847 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 FAM109AQ8N4B1 249 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 SYT8Q8NBV8 401 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 MBD3L2Q8NHZ7 208 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 RSPRY1Q96DX4 576 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TEPSINQ96N21 525 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PYM1Q9BRP8 204 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 AMBRA1Q9C0C7 1298 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 SMOC2Q9H3U7 446 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TAF1DQ9H5J8 278 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 ZCCHC4Q9H5U6 513 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 GBA2Q9HCG7 927 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TRIM36Q9NQ86 728 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PRDM8Q9NQV8 689 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 RXFP3Q9NSD7 469 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 INTS13Q9NVM9 706 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 MRPS18AQ9NVS2 196 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 RRN3Q9NYV6 651 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TRPM5Q9NZQ8 1165 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 NKX1-2Q9UD57 310 aaPredicted RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 SRP68Q9UHB9 627 aaKnown RBP3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 TMEM98Q9Y2Y6 226 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 CHST2Q9Y4C5 530 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 HS3ST4Q9Y661 456 aa3.4□□□□□ -1.87
TRAJ40-201ENST00000390497 PNMA6EA0A0J9YXQ4 647 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 HMX3A6NHT5 357 aa3.39□□□□□ -1.87
TRAJ40-201ENST00000390497 RRN3P2A6NIE6 340 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms