RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 THRAP3Q9Y2W1 955 aaKnown RBP4.21□□□□□ -1.74
TRAV40-201ENST00000390467 FER1L4A9Z1Z3 1794 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 A0A1W2PPL8 197 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 E2F8A0AVK6 867 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 BTN3A1O00481 513 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 THP07101 528 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 CYP2C9P11712 490 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 CERS1P27544 350 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 GPSM2P81274 684 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 HOXA4Q00056 320 aaPredicted RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 E2F1Q01094 437 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 PTCHD3Q3KNS1 767 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 RNASE12Q5GAN4 147 aaKnown RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 DCAF12L1Q5VU92 463 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 MORN5Q5VZ52 161 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 LMBRD2Q68DH5 695 aaPredicted RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 SLC9A4Q6AI14 798 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 C11orf87Q6NUJ2 197 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 ZNF783Q6ZMS7 281 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 CATSPERGQ6ZRH7 1159 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 CAND1Q86VP6 1230 aaKnown RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 FAM177A1Q8N128 213 aaPredicted RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 IL31RAQ8NI17 732 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 BPIFB1Q8TDL5 484 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 C5orf34Q96MH7 638 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 PRR25Q96S07 402 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 MS4A7Q9GZW8 240 aaPredicted RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 ZIM2Q9NZV7 527 aa4.2□□□□□ -1.74
TRAV40-201ENST00000390467 CCNL1Q9UK58 526 aaPredicted RBP4.2□□□□□ -1.74
TRAV40-201ENST00000390467 SMIM35A0A1B0GVV1 85 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 MYO1CO00159 1063 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 AP4M1O00189 453 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 PRPF3O43395 683 aaKnown RBP4.19□□□□□ -1.74
TRAV40-201ENST00000390467 EXOC3O60645 756 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 TUSC2O75896 110 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 TUBB4AP04350 444 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 ARHGAP25P42331 645 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 RENBPP51606 427 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 PSG6Q00889 435 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 SLC13A2Q13183 592 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 MGAT5BQ3V5L5 792 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 ANO6Q4KMQ2 910 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 L1TD1Q5T7N2 865 aaKnown RBP4.19□□□□□ -1.74
TRAV40-201ENST00000390467 NPNTQ6UXI9 565 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 IZUMO1Q8IYV9 350 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 MPP5Q8N3R9 675 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 C8orf58Q8NAV2 365 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 ABHD11Q8NFV4 315 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 OR6B3Q8NGW1 331 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 RUNDC1Q96C34 613 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 DAZAP1Q96EP5 407 aaKnown RBP4.19□□□□□ -1.74
TRAV40-201ENST00000390467 ZNF48Q96MX3 618 aaPredicted RBP4.19□□□□□ -1.74
TRAV40-201ENST00000390467 ASB2Q96Q27 587 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 C17orf80Q9BSJ5 609 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 NRIP3Q9NQ35 241 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 STK32BQ9NY57 414 aa4.19□□□□□ -1.74
TRAV40-201ENST00000390467 H7C1Q1 480 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 TBX3O15119 743 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 PHGDHO43175 533 aaKnown RBP4.18□□□□□ -1.74
TRAV40-201ENST00000390467 RFPL1O75677 317 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 TOP3BO95985 862 aaKnown RBP4.18□□□□□ -1.74
TRAV40-201ENST00000390467 EN2P19622 333 aaPredicted RBP4.18□□□□□ -1.74
TRAV40-201ENST00000390467 EPHB1P54762 984 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 GTF2H3Q13889 308 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 ZDHHC24Q6UX98 284 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 ZNF366Q8N895 744 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 TERB1Q8NA31 727 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 OR56A3Q8NH54 315 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 RPL36ALQ969Q0 106 aaKnown RBP4.18□□□□□ -1.74
TRAV40-201ENST00000390467 ZC3H10Q96K80 434 aaKnown RBP4.18□□□□□ -1.74
TRAV40-201ENST00000390467 SNX18Q96RF0 628 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 MMS19Q96T76 1030 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 C22orf23Q9BZE7 217 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 CIPCQ9C0C6 399 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 SPRTNQ9H040 489 aaPredicted RBP4.18□□□□□ -1.74
TRAV40-201ENST00000390467 GBA2Q9HCG7 927 aaPredicted RBP4.18□□□□□ -1.74
TRAV40-201ENST00000390467 ASIC5Q9NY37 505 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 KLHL13Q9P2N7 655 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 USP19O94966 1318 aa4.18□□□□□ -1.74
TRAV40-201ENST00000390467 TCRBV5S1A1TA0A578 114 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 A6NNZ2 444 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 KCNU1A8MYU2 1149 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 CYP2A6P11509 494 aaPredicted RBP4.17□□□□□ -1.74
TRAV40-201ENST00000390467 XRCC6P12956 609 aaKnown RBP eCLIP4.17□□□□□ -1.74
TRAV40-201ENST00000390467 SLC7A1P30825 629 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 ALDH5A1P51649 535 aaPredicted RBP4.17□□□□□ -1.74
TRAV40-201ENST00000390467 PRKAG1P54619 331 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 IGBP1P78318 339 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 SATB1Q01826 763 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 MLC1Q15049 377 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 LRRC41Q15345 812 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 APOA5Q6Q788 366 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 MICU3Q86XE3 530 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 GALNT16Q8N428 558 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 C9orf106Q8NAJ2 232 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 DNAJB14Q8TBM8 379 aa4.17□□□□□ -1.74
TRAV40-201ENST00000390467 DPCDQ9BVM2 203 aaPredicted RBP4.17□□□□□ -1.74
TRAV40-201ENST00000390467 PRSS22Q9GZN4 317 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms