RNA–Protein interactions for RNA: ENST00000390371.3

TRBV6-6-201, Transcript of T cell receptor beta variable 6-6, humanhuman

APPRIS P1 BASIC

Gene TRBV6-6, Length 388 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6-201ENST00000390371 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 CCDC70Q6NSX1 233 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 DNAJC24Q6P3W2 148 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 CD300LGQ6UXG3 332 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 SCARA5Q6ZMJ2 495 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 NT5DC3Q86UY8 548 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 RHOT1Q8IXI2 618 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 SLC35F6Q8N357 371 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 ARHGAP18Q8N392 663 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 RASGEF1CQ8N431 466 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 WDTC1Q8N5D0 677 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 EIF1ADQ8N9N8 165 aaKnown RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 SP7Q8TDD2 431 aaPredicted RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 PIK3R5Q8WYR1 880 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 OVCA2Q8WZ82 227 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 TFAP2BQ92481 460 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 CD101Q93033 1021 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 LPPQ93052 612 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 PGAP3Q96FM1 320 aaPredicted RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 C8orf48Q96LL4 319 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 TGS1Q96RS0 853 aaKnown RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 PKMYT1Q99640 499 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 SYT15Q9BQS2 421 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 MRPL45Q9BRJ2 306 aaKnown RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 NUP85Q9BW27 656 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 FRMD8P1Q9BZ68 369 aaPredicted RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 TTYH1Q9H313 450 aaPredicted RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 FBXO44Q9H4M3 255 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 RETREG1Q9H6L5 497 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 SYNCQ9H7C4 482 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 NRDE2Q9H7Z3 1164 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 CERS4Q9HA82 394 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 DMAP1Q9NPF5 467 aaPredicted RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 DDX56Q9NY93 547 aaKnown RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 FNIP2Q9P278 1114 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 PUF60Q9UHX1 559 aaKnown RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 FEZ2Q9UHY8 353 aaPredicted RBP8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 MTUS1Q9ULD2 1270 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 POLIQ9UNA4 740 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 PCDHA3Q9Y5H8 950 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 CAPN6Q9Y6Q1 641 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 LAMA3Q16787 3333 aa8.03□□□□□ -1.12
TRBV6-6-201ENST00000390371 NLRC5Q86WI3 1866 aa8.02□□□□□ -1.12
TRBV6-6-201ENST00000390371 FAM92AA1XBS5 289 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 LCHNA4D1U4 455 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 LINC01553A4QN01 128 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 TBKBP1A7MCY6 615 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 M0QYV0 167 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 DPYSL4O14531 572 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 BUB1BO60566 1050 aaPredicted RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 PALMO75781 387 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 RNF8O76064 485 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 DDHD2O94830 711 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 RTN3O95197 1032 aaPredicted RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 SLU7O95391 586 aaKnown RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 F9P00740 461 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 SOD2P04179 222 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 RB1P06400 928 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 FGFR1P11362 822 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 ABCB4P21439 1286 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 RRM1P23921 792 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 BRD2P25440 801 aaKnown RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 HTR7P34969 479 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 PPP3CCP48454 512 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 ZNF143P52747 638 aaPredicted RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 SLC6A3Q01959 620 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 HADHQ16836 314 aaKnown RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 BOLA3Q53S33 107 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 TAF3Q5VWG9 929 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 WSCD1Q658N2 575 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 PM20D1Q6GTS8 502 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 DCUN1D2Q6PH85 259 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 STRADAQ7RTN6 431 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 DDX53Q86TM3 631 aaKnown RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 XYLT1Q86Y38 959 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 PALB2Q86YC2 1186 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 FUKQ8N0W3 1084 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 C3orf58Q8NDZ4 430 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 MYRIPQ8NFW9 859 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 NT5C3BQ969T7 300 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 TMEM169Q96HH4 297 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 SPATA17Q96L03 361 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 ZNF558Q96NG5 402 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 TWNKQ96RR1 684 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 WDR24Q96S15 920 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 CDK5RAP1Q96SZ6 601 aaKnown RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 ZSWIM1Q9BR11 485 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 CNPY3Q9BT09 278 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 TTPALQ9BTX7 342 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 TLR10Q9BXR5 811 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 FAM129AQ9BZQ8 928 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 ZCWPW1Q9H0M4 648 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 PRDM12Q9H4Q4 367 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 GOLGA2P5Q9HBQ8 144 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 RRAGDQ9NQL2 400 aaPredicted RBP8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 IL37Q9NZH6 218 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 DPP7Q9UHL4 492 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 ZMYM5Q9UJ78 669 aa8.02□□□□□ -1.13
TRBV6-6-201ENST00000390371 STAP1Q9ULZ2 295 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms