RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 IL5RAQ01344 420 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 NFIL3Q16649 462 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 CYP51A1Q16850 503 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 CYP4A22Q5TCH4 519 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 KIAA1841Q6NSI8 718 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 C17orf50Q8WW18 174 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 OXNAD1Q96HP4 312 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 TUFT1Q9NNX1 390 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 PSMA3P25788 255 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 MAGEA10P43363 369 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 PLIN5Q00G26 463 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 EPS8Q12929 822 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 PPP1R16BQ96T49 567 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 SMIM31A0A1B0GVY4 71 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 ADCY6O43306 1168 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 PSMG1O95456 288 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 Q3C1V9 767 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 CACHD1Q5VU97 1274 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 COMMD8Q9NX08 183 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 PLEKP08567 350 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 HIST1H2AGP0C0S8 130 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 HIST1H2ADP20671 130 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 KDELC2Q7Z4H8 507 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 AGAP11Q8TF27 550 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 HIST1H2AHQ96KK5 128 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 HIST1H2AJQ99878 128 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 H2AFJQ9BTM1 129 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 C9orf16Q9BUW7 83 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 PLAGL2Q9UPG8 496 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 LCP1P13796 627 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 ARPP19P56211 112 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 NFKBIL1Q9UBC1 381 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 ABCB11O95342 1321 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 NPHP3-ACAD11A0A0J9YXS1 232 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 E9PBE3 544 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 DDHD2O94830 711 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 EXOSC10Q01780 885 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 USP17L6PQ6QN14 398 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 C2orf40Q9H1Z8 148 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 FAM20BO75063 409 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 TSNQ15631 228 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 GSTA3Q16772 222 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 OTOAQ7RTW8 1153 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 TPRKBQ9Y3C4 175 aa12.85□□□□□ -0.35
SRGAP3-202ENST00000383836 SLC9A5Q14940 896 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 DOK7Q18PE1 504 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 TMEM47Q9BQJ4 181 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 POLR3FQ9H1D9 316 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 PLEKHA5Q9HAU0 1116 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 TMEM260Q9NX78 707 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 DNAJC16Q9Y2G8 782 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 MEI4A8MW99 385 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 PPP1R3GB7ZBB8 358 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 GUCY1B2O75343 617 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 RGS20O76081 388 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 BAIAP3O94812 1187 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 PGK2P07205 417 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 SLC16A1P53985 500 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 POU4F1Q01851 419 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 SNX17Q15036 470 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 PDK1Q15118 436 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ALX1Q15699 326 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 EID3Q8N140 333 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 RSL24D1Q9UHA3 163 aaKnown RBP12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ABLIM1O14639 778 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 EYA4O95677 639 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 GLI1P08151 1106 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 MLNP12872 115 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 SULT1E1P49888 294 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ZNF844Q08AG5 666 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 AENQ8WTP8 325 aaKnown RBP12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ABCB1P08183 1280 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ATP6V1C1P21283 382 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 NCALDP61601 193 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 RAB42Q8N4Z0 105 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 APPL2Q8NEU8 664 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ENTPD7Q9NQZ7 604 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
SRGAP3-202ENST00000383836 DUSP10Q9Y6W6 482 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms