RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RASSF3Q86WH2 238 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 TTC30AQ86WT1 665 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 ZSWIM2Q8NEG5 633 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 CXorf38Q8TB03 319 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 DNAJC19Q96DA6 116 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 CBWD1Q9BRT8 395 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 INTS13Q9NVM9 706 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 SIX4Q9UIU6 781 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
VCX3A-201ENST00000381089 KIAA1549LQ6ZVL6 1849 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 MYO16Q9Y6X6 1858 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 ANAPC1Q9H1A4 1944 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 NUP205Q92621 2012 aa17.09■□□□□ 0.33
VCX3A-201ENST00000381089 CHD6Q8TD26 2715 aa17.08■□□□□ 0.33
VCX3A-201ENST00000381089 HELZP42694 1942 aaKnown RBP17.08■□□□□ 0.33
VCX3A-201ENST00000381089 ZNF233A6NK53 670 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 LEFTY2O00292 366 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 CEACAM1P13688 526 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 PDCP20941 246 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 BDNFP23560 247 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 STAT6P42226 847 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 DHPSP49366 369 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-201ENST00000381089 PSMC1P62191 440 aaKnown RBP17.08■□□□□ 0.32
VCX3A-201ENST00000381089 LMAN2Q12907 356 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 CRY1Q16526 586 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 CCDC142Q17RM4 750 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 DUOXA2Q1HG44 320 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 SH3PXD2AQ5TCZ1 1133 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 UNQ6494/PRO21346Q6UXR6 183 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 USP49Q70CQ1 688 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 DDX42Q86XP3 938 aaKnown RBP eCLIP17.08■□□□□ 0.32
VCX3A-201ENST00000381089 MMS19Q96T76 1030 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 POLMQ9NP87 494 aaPredicted RBP17.08■□□□□ 0.32
VCX3A-201ENST00000381089 PANK4Q9NVE7 773 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 THADAQ6YHU6 1953 aa17.08■□□□□ 0.32
VCX3A-201ENST00000381089 K7EQS6 105 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 MAP3K13O43283 966 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 HCRTO43612 131 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 ABL1P00519 1130 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 APODP05090 189 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 CSRP1P21291 193 aaKnown RBP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 WARSP23381 471 aaKnown RBP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 OPRD1P41143 372 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 EIF2DP41214 584 aaKnown RBP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 DPP6P42658 865 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 CASP5P51878 434 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 SLC7A9P82251 487 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 FOXC1Q12948 553 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 BYSLQ13895 437 aaKnown RBP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 LPCAT2Q7L5N7 544 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 FILIP1Q7Z7B0 1213 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 CCDC33Q8N5R6 958 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 MDGA1Q8NFP4 955 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 MYCBPAPQ8TBZ2 947 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 WHAMMQ8TF30 809 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 PIGKQ92643 395 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 SLITRK1Q96PX8 696 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 PNKPQ96T60 521 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 TTLL2Q9BWV7 592 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 NUSAP1Q9BXS6 441 aaKnown RBP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 SNX25Q9H3E2 840 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 KIAA1586Q9HCI6 787 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 BCCIPQ9P287 314 aaKnown RBP eCLIP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 FBXO2Q9UK22 296 aaPredicted RBP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
VCX3A-201ENST00000381089 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
VCX3A-201ENST00000381089 ABCA7Q8IZY2 2146 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.06■□□□□ 0.32
VCX3A-201ENST00000381089 ATP2C2O75185 946 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
VCX3A-201ENST00000381089 CD2BP2O95400 341 aaKnown RBP17.06■□□□□ 0.32
VCX3A-201ENST00000381089 ADH1CP00326 375 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 CYP17A1P05093 508 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 PDGFRBP09619 1106 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 LMO2P25791 158 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 NOP14P78316 857 aaKnown RBP17.06■□□□□ 0.32
VCX3A-201ENST00000381089 RESTQ13127 1097 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 PREPLQ4J6C6 727 aaPredicted RBP17.06■□□□□ 0.32
VCX3A-201ENST00000381089 EOGTQ5NDL2 527 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 TDRD10Q5VZ19 366 aaKnown RBP17.06■□□□□ 0.32
VCX3A-201ENST00000381089 HS2ST1Q7LGA3 356 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 WDR49Q8IV35 697 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 KBTBD7Q8WVZ9 684 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 C8orf48Q96LL4 319 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 LRRC27Q9C0I9 530 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 CRTAC1Q9NQ79 661 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 TBC1D14Q9P2M4 693 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 EVLQ9UI08 416 aaPredicted RBP17.06■□□□□ 0.32
VCX3A-201ENST00000381089 CPQQ9Y646 472 aa17.06■□□□□ 0.32
VCX3A-201ENST00000381089 TMEM8BA6NDV4 472 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 ZNF840PA6NDX5 716 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 GIPC1O14908 333 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 BCKDHBP21953 392 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 DHCR24Q15392 516 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 UAP1L1Q3KQV9 507 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
VCX3A-201ENST00000381089 ADGRG2Q8IZP9 1017 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms