RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 CYP21A2P08686 494 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ENO3P13929 434 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SDC4P31431 198 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SARSP49591 514 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 NAA20P61599 178 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PURAQ00577 322 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 TRIM32Q13049 653 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 EFHC2Q5JST6 749 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PID1Q7Z2X4 250 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 MIER2Q8N344 545 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 RAB42Q8N4Z0 105 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 AGAP11Q8TF27 550 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 GDPD5Q8WTR4 605 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 HDAC2Q92769 488 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 TMA16Q96EY4 203 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 UQCC2Q9BRT2 126 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 TRABDQ9H4I3 376 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 C20orf96Q9NUD7 363 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ASNSD1Q9NWL6 643 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 FKBP14Q9NWM8 211 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 AK5Q9Y6K8 562 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ZC3H11AO75152 810 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CCNKO75909 580 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SRP72O76094 671 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ATP1A1P05023 1023 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 HSMCR30P0CW71 290 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 IL12AP29459 219 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ACOT2P49753 483 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CCR3P51677 355 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CUL4AQ13619 759 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 E4F1Q66K89 784 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 MND1Q9BWT6 205 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CLIC5Q9NZA1 410 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 EIF2S3P41091 472 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 RAB25P57735 213 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 EGFLAMQ63HQ2 1017 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SLC9A4Q6AI14 798 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SLFN12LQ6IEE8 588 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 MZT2BQ6NZ67 158 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SLC44A2Q8IWA5 706 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 MB21D1Q8N884 522 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 NUP85Q9BW27 656 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 LATS2Q9NRM7 1088 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 FAM49BQ9NUQ9 324 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 NCK2O43639 380 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PEX1O43933 1283 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SPAG6O75602 509 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 NPTXRO95502 500 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ARHGEF7Q14155 803 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF284Q2VY69 593 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 FGD2Q7Z6J4 655 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 LRRC71Q8N4P6 559 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 FEM1BQ9UK73 627 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SNX9Q9Y5X1 595 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SPATA31A6Q5VVP1 1343 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 MAGEB16A2A368 324 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PIPSLA2A3N6 862 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 TJP3O95049 919 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 FGFR2P21802 821 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 PHC1P78364 1004 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CCZ1BP86790 482 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 CCZ1P86791 482 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 ANKS6Q68DC2 871 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 SETD3Q86TU7 594 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 C12orf50Q8NA57 414 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-202ENST00000380833 HDHD2Q9H0R4 259 aa11.16□□□□□ -0.62
CLCN4-202ENST00000380833 MMP1P03956 469 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ZNF12P17014 697 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 CASP4P49662 377 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 NR1H2P55055 460 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 DHX34Q14147 1143 aaKnown RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 TOMM20Q15388 145 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ZFYVE28Q9HCC9 887 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 UBA2Q9UBT2 640 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 FKBP3Q00688 224 aaKnown RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 GPS1Q13098 491 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 UBE3CQ15386 1083 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 SULT1C3Q6IMI6 304 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 APPL2Q8NEU8 664 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 PAGE5Q96GU1 130 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 MTIF3Q9H2K0 278 aaKnown RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 IL1RL2Q9HB29 575 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ABI2Q9NYB9 513 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ATXN2Q99700 1313 aaKnown RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 TRIM49D1C9J1S8 452 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 PRKACBP22694 351 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 COPAP53621 1224 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ORC1Q13415 861 aa11.15□□□□□ -0.62
CLCN4-202ENST00000380833 TOP3AQ13472 1001 aaPredicted RBP11.15□□□□□ -0.62
CLCN4-202ENST00000380833 ARHGEF19Q8IW93 802 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms