RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PRR7Q8TB68 274 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 MYCBPAPQ8TBZ2 947 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 GPR152Q8TDT2 470 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 FGF13Q92913 245 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 SLC35C1Q96A29 364 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 MCRS1Q96EZ8 462 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 NIF3L1Q9GZT8 377 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ABCB6Q9NP58 842 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CRTAC1Q9NQ79 661 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 CDH7Q9ULB5 785 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ASB3Q9Y575 518 aa9.84□□□□□ -0.83
HMGN1-202ENST00000380747 MTCL1Q9Y4B5 1905 aaKnown RBP9.84□□□□□ -0.83
HMGN1-202ENST00000380747 ACACBO00763 2458 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 OTOGLQ3ZCN5 2332 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 LAMP2P13473 410 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 CEBPBP17676 345 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 BDNFP23560 247 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 CCR2P41597 374 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 FMO5P49326 533 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 NDST1P52848 882 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 LRMPQ12912 555 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 CFAP221Q4G0U5 840 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 PRSS36Q5K4E3 855 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 CCDC183Q5T5S1 534 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 SASS6Q6UVJ0 657 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 ACOT1Q86TX2 421 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 RETREG3Q86VR2 466 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 SCUBE3Q8IX30 993 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 NPAS3Q8IXF0 933 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 B3GALNT2Q8NCR0 500 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 STKLD1Q8NE28 680 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 PSMG2Q969U7 264 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 TCEAL4Q96EI5 215 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 PCED1BQ96HM7 432 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 FUBP3Q96I24 572 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGN1-202ENST00000380747 TNIP3Q96KP6 325 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 CNOT6LQ96LI5 555 aaKnown RBP9.83□□□□□ -0.84
HMGN1-202ENST00000380747 MED15Q96RN5 788 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 MED10Q9BTT4 135 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 BCO2Q9BYV7 579 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 SEMA4AQ9H3S1 761 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 CYP3A43Q9HB55 503 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 AVENQ9NQS1 362 aaPredicted RBP9.83□□□□□ -0.84
HMGN1-202ENST00000380747 EPS15L1Q9UBC2 864 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 HMGXB4Q9UGU5 601 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 MAGED2Q9UNF1 606 aaPredicted RBP9.83□□□□□ -0.84
HMGN1-202ENST00000380747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGN1-202ENST00000380747 ZFP37Q9Y6Q3 630 aaPredicted RBP9.83□□□□□ -0.84
HMGN1-202ENST00000380747 KMT2BQ9UMN6 2715 aaPredicted RBP9.83□□□□□ -0.84
HMGN1-202ENST00000380747 C2orf16Q68DN1 1984 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 ZFHX4Q86UP3 3567 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 MYO10Q9HD67 2058 aa9.83□□□□□ -0.84
HMGN1-202ENST00000380747 ATP8B3O60423 1300 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 A0A1W2PRU2 124 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 SLC38A8A6NNN8 435 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 CLDN5O00501 218 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 AFPP02771 609 aaKnown RBP9.82□□□□□ -0.84
HMGN1-202ENST00000380747 TRIM21P19474 475 aaKnown RBP9.82□□□□□ -0.84
HMGN1-202ENST00000380747 AOC1P19801 751 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 ANXA13P27216 316 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 GABRR2P28476 465 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 ERCC5P28715 1186 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-202ENST00000380747 GRIK1P39086 918 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 MAGEA11P43364 429 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 MTIF2P46199 727 aaKnown RBP9.82□□□□□ -0.84
HMGN1-202ENST00000380747 CETN1Q12798 172 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 KCNH2Q12809 1159 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 TEAD2Q15562 447 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 ZNF394Q53GI3 561 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 CWF19L1Q69YN2 538 aaKnown RBP9.82□□□□□ -0.84
HMGN1-202ENST00000380747 TMC8Q8IU68 726 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 TRIM59Q8IWR1 403 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 CCDC105Q8IYK2 499 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 SHKBP1Q8TBC3 707 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 RSAD2Q8WXG1 361 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 NT5C1BQ96P26 610 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 GCNAQ96QF7 691 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 LRRC3Q9BY71 257 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 B3GNT5Q9BYG0 378 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 ZNF518BQ9C0D4 1074 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 MFSD1Q9H3U5 465 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 SLITRK6Q9H5Y7 841 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 KCNK12Q9HB15 430 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 ZNF334Q9HCZ1 680 aaPredicted RBP9.82□□□□□ -0.84
HMGN1-202ENST00000380747 COQ4Q9Y3A0 265 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 DENND4AQ7Z401 1863 aa9.82□□□□□ -0.84
HMGN1-202ENST00000380747 NRG2O14511 850 aaPredicted RBP9.81□□□□□ -0.84
HMGN1-202ENST00000380747 CILPO75339 1184 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 MOSPD3O75425 235 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 MICAL2O94851 1124 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 FGF19O95750 216 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 CSH1P0DML2 217 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 CSH2P0DML3 217 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 CCDC130P13994 396 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 EPHA5P54756 1037 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 MARSP56192 900 aaKnown RBP9.81□□□□□ -0.84
HMGN1-202ENST00000380747 INCA1Q0VD86 236 aa9.81□□□□□ -0.84
HMGN1-202ENST00000380747 TDGQ13569 410 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms