RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 RRN3P2A6NIE6 340 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 KBTBD13C9JR72 458 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 GOLGA8SH3BPF8 625 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 DNALI1O14645 258 aaPredicted RBP22.63■■□□□ 1.21
TRIM54-202ENST00000380075 MICAL2O94851 1124 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 ACSL3O95573 720 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 MAGEA9P43362 315 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 ACLYP53396 1101 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 STILQ15468 1287 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 MCRS1Q96EZ8 462 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 CPXM1Q96SM3 734 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 DDX23Q9BUQ8 820 aaKnown RBP22.63■■□□□ 1.21
TRIM54-202ENST00000380075 PLEKHA5Q9HAU0 1116 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 AGAP1Q9UPQ3 857 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 FRMPD3Q5JV73 1810 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 SMIM23A6NLE4 172 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 ABHD2P08910 425 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 VPS41P49754 854 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 PURAQ00577 322 aaKnown RBP22.63■■□□□ 1.21
TRIM54-202ENST00000380075 OASLQ15646 514 aaKnown RBP22.63■■□□□ 1.21
TRIM54-202ENST00000380075 UBAP2Q5T6F2 1119 aaKnown RBP22.63■■□□□ 1.21
TRIM54-202ENST00000380075 UHMK1Q8TAS1 419 aaKnown RBP22.63■■□□□ 1.21
TRIM54-202ENST00000380075 SELENOSQ9BQE4 189 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 CCDC77Q9BR77 488 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 TSEN34Q9BSV6 310 aaKnown RBP22.63■■□□□ 1.21
TRIM54-202ENST00000380075 ADAM7Q9H2U9 754 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 DPP3Q9NY33 737 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 NINJ2Q9NZG7 142 aa22.63■■□□□ 1.21
TRIM54-202ENST00000380075 LRCH4O75427 683 aa22.62■■□□□ 1.21
TRIM54-202ENST00000380075 CSDE1O75534 798 aaKnown RBP22.62■■□□□ 1.21
TRIM54-202ENST00000380075 KIAA0754O94854 1291 aa22.62■■□□□ 1.21
TRIM54-202ENST00000380075 IFI35P80217 286 aaPredicted RBP22.62■■□□□ 1.21
TRIM54-202ENST00000380075 PCBP1Q15365 356 aaKnown RBP eCLIP22.62■■□□□ 1.21
TRIM54-202ENST00000380075 TAZQ16635 292 aa22.62■■□□□ 1.21
TRIM54-202ENST00000380075 P3H1Q32P28 736 aa22.62■■□□□ 1.21
TRIM54-202ENST00000380075 JOSD2Q8TAC2 188 aa22.62■■□□□ 1.21
TRIM54-202ENST00000380075 TWNKQ96RR1 684 aa22.62■■□□□ 1.21
TRIM54-202ENST00000380075 CCDC134Q9H6E4 229 aa22.62■■□□□ 1.21
TRIM54-202ENST00000380075 A0A087WUV0 522 aaPredicted RBP22.61■■□□□ 1.21
TRIM54-202ENST00000380075 C3orf70A6NLC5 250 aaPredicted RBP22.61■■□□□ 1.21
TRIM54-202ENST00000380075 M0QYV0 167 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 CHN1P15882 459 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 GPD2P43304 727 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 STAT4Q14765 748 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 MARCH8Q5T0T0 291 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 TXNRD3NBQ6F5E7 133 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 KIAA0319LQ8IZA0 1049 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 ANKLE1Q8NAG6 615 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 PPP1R16BQ96T49 567 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 FAM118BQ9BPY3 351 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 RASSF4Q9H2L5 321 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 PCDH9Q9HC56 1237 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 METTL5Q9NRN9 209 aaKnown RBP22.61■■□□□ 1.21
TRIM54-202ENST00000380075 MOXD2PA6NHM9 499 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 ERBB2P04626 1255 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 SLCO1A2P46721 670 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 MYO1EQ12965 1108 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 MORF4L2Q15014 288 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 SLC35B2Q8TB61 432 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 KAT2BQ92831 832 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 CHMP6Q96FZ7 201 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 HEXIM2Q96MH2 286 aaKnown RBP22.61■■□□□ 1.21
TRIM54-202ENST00000380075 TTC25Q96NG3 672 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 HMGXB4Q9UGU5 601 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 PHF24Q9UPV7 400 aa22.61■■□□□ 1.21
TRIM54-202ENST00000380075 A0A1W2PQ45 241 aaPredicted RBP22.6■■□□□ 1.21
TRIM54-202ENST00000380075 A0A1W2PQY0 241 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 RNF8O76064 485 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 ARSEP51690 589 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 KYNUQ16719 465 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 LCLAT1Q6UWP7 414 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 BBS12Q6ZW61 710 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 RIBC1Q8N443 379 aaPredicted RBP22.6■■□□□ 1.21
TRIM54-202ENST00000380075 PAWRQ96IZ0 340 aaKnown RBP22.6■■□□□ 1.21
TRIM54-202ENST00000380075 NT5C1AQ9BXI3 368 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 INTS9Q9NV88 658 aaKnown RBP22.6■■□□□ 1.21
TRIM54-202ENST00000380075 ASNSD1Q9NWL6 643 aa22.6■■□□□ 1.21
TRIM54-202ENST00000380075 TPX2Q9ULW0 747 aaKnown RBP22.6■■□□□ 1.21
TRIM54-202ENST00000380075 KPNA6O60684 536 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 RDXP35241 583 aaKnown RBP22.59■■□□□ 1.21
TRIM54-202ENST00000380075 PCK1P35558 622 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 LONRF1Q17RB8 773 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 PCGF5Q86SE9 256 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 C10orf67Q8IYJ2 551 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 MDM1Q8TC05 714 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 PPP1R13LQ8WUF5 828 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 ATXN2LQ8WWM7 1075 aaKnown RBP22.59■■□□□ 1.21
TRIM54-202ENST00000380075 PPM1EQ8WY54 764 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 KIF12Q96FN5 646 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 MTG1Q9BT17 334 aaPredicted RBP22.59■■□□□ 1.21
TRIM54-202ENST00000380075 PHACTR1Q9C0D0 580 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 SENP6Q9GZR1 1112 aaPredicted RBP22.59■■□□□ 1.21
TRIM54-202ENST00000380075 LGALS13Q9UHV8 139 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 SHOC2Q9UQ13 582 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 KDELR1P24390 212 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 ARFGAP1Q8N6T3 406 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 RBM15Q96T37 977 aaKnown RBP eCLIP22.59■■□□□ 1.21
TRIM54-202ENST00000380075 GCOM2Q9BZD3 368 aaPredicted RBP22.59■■□□□ 1.21
TRIM54-202ENST00000380075 TJP2Q9UDY2 1190 aa22.59■■□□□ 1.21
TRIM54-202ENST00000380075 CDH16O75309 829 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms