RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 DMDP11532 3685 aa26.25■■□□□ 1.79
TNFRSF4-201ENST00000379236 KINO60870 393 aaKnown RBP26.24■■□□□ 1.79
TNFRSF4-201ENST00000379236 AKAP3O75969 853 aa26.24■■□□□ 1.79
TNFRSF4-201ENST00000379236 LMNAP02545 664 aaKnown RBP26.24■■□□□ 1.79
TNFRSF4-201ENST00000379236 FZD5Q13467 585 aa26.24■■□□□ 1.79
TNFRSF4-201ENST00000379236 MAML2Q8IZL2 1156 aaPredicted RBP26.24■■□□□ 1.79
TNFRSF4-201ENST00000379236 FMR1NBQ8N0W7 255 aaPredicted RBP26.24■■□□□ 1.79
TNFRSF4-201ENST00000379236 ELMO3Q96BJ8 720 aa26.24■■□□□ 1.79
TNFRSF4-201ENST00000379236 MYO16Q9Y6X6 1858 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 CLDN5O00501 218 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 ABL1P00519 1130 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 HLA-DRAP01903 254 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 TRIM49P0CI25 452 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 TRIM49CP0CI26 452 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 HDCP19113 662 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 PPP3CCP48454 512 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 NOP14P78316 857 aaKnown RBP26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 AMPD2Q01433 879 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 RUNX3Q13761 415 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 MTF1Q14872 753 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 PON2Q15165 354 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 DGKKQ5KSL6 1271 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 SMYD4Q8IYR2 804 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 ARL14EPQ8N8R7 260 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 ATRIPQ8WXE1 791 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 SLITRK1Q96PX8 696 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 CYP2S1Q96SQ9 504 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 TSG101Q99816 390 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 B3GNT5Q9BYG0 378 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 EBF3Q9H4W6 596 aa26.23■■□□□ 1.79
TNFRSF4-201ENST00000379236 C2orf78A6NCI8 922 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 CHRNB1P11230 501 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 GCLMP48507 274 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 IFNAR2P48551 515 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 CCR3P51677 355 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 PDGFRLQ15198 375 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 EDRF1Q3B7T1 1238 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 TRIM68Q6AZZ1 485 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 ZNF687Q8N1G0 1237 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 SMARCE1Q969G3 411 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 HINFPQ9BQA5 517 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 DNAI2Q9GZS0 605 aa26.22■■□□□ 1.79
TNFRSF4-201ENST00000379236 CETN3O15182 167 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 RTN3O95197 1032 aaPredicted RBP26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 ASS1P00966 412 aaKnown RBP26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 EPB41P11171 864 aaKnown RBP26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 PFKLP17858 780 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 USP46P62068 366 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 ENPEPQ07075 957 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 SPOPLQ6IQ16 392 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 TXNDC11Q6PKC3 985 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 TSSK4Q6SA08 328 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 ACOT1Q86TX2 421 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 FAM35AQ86V20 835 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 ADSSL1Q8N142 457 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 NUP93Q8N1F7 819 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 EXOC4Q96A65 974 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 SMARCD1Q96GM5 515 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 GSDMAQ96QA5 445 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 FAM83CQ9BQN1 747 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 TTLL2Q9BWV7 592 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 SDCBP2Q9H190 292 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 PRMT8Q9NR22 394 aaPredicted RBP26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 DUS2Q9NX74 493 aaKnown RBP26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 PCDHGA2Q9Y5H1 932 aa26.21■■□□□ 1.79
TNFRSF4-201ENST00000379236 NDST1P52848 882 aa26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 ZNF658Q5TYW1 1059 aaPredicted RBP26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 CPA6Q8N4T0 437 aa26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 SLC22A12Q96S37 553 aa26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 GTPBP4Q9BZE4 634 aaKnown RBP26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 DMAP1Q9NPF5 467 aaPredicted RBP26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 RBM12Q9NTZ6 932 aaKnown RBP26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 ZSCAN32Q9NX65 697 aa26.2■■□□□ 1.78
TNFRSF4-201ENST00000379236 STX10O60499 249 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 CACNA2D1P54289 1103 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 NRLP54845 237 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 TAF10Q12962 218 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 USP4Q13107 963 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 ZNF77Q15935 545 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 ZCWPW2Q504Y3 356 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 C1orf220Q5T0J3 134 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 UNC93AQ86WB7 457 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 PDZD8Q8NEN9 1154 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 SH3RF2Q8TEC5 729 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 ATP2A3Q93084 1043 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 FBXO32Q969P5 355 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 FAM126AQ9BYI3 521 aaPredicted RBP26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 TMEM8AQ9HCN3 771 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 HPS4Q9NQG7 708 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 GCNT4Q9P109 453 aa26.19■■□□□ 1.78
TNFRSF4-201ENST00000379236 AP1G2O75843 785 aa26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 YWHAQP27348 245 aa26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 ASPAP45381 313 aa26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 CXCL12P48061 93 aa26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 PPP3CAQ08209 521 aa26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 GRSF1Q12849 480 aaKnown RBP eCLIP26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 ORC1Q13415 861 aa26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 STIM1Q13586 685 aa26.18■■□□□ 1.78
TNFRSF4-201ENST00000379236 SPEM1Q8N4L4 309 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms